Synechocystis sp. PCC 6803: sll0088
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Entry
sll0088 CDS
T00004
Name
(GenBank) unknown protein
KO
K09012
DeoR family transcriptional regulator, suf operon transcriptional repressor
Organism
syn
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syn03000
]
sll0088
Transcription factors [BR:
syn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
sll0088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_20
PadR
HTH_34
HTH_DeoR
HTH_5
MarR_2
HTH_11
TrmB
FaeA
HxlR
HTH_Crp_2
MarR
LexA_DNA_bind
TFIIE_alpha
HTH_29
HTH_10
Rrf2
HTH_12
Fe_dep_repress
HTH_1
PaaX
RepL
HTH_8
GntR
Replic_Relax
HTH_28
HTH_36
FeoC
RP-C
SMC_ScpB
Mga
B-block_TFIIIC
DUF5821
Motif
Other DBs
NCBI-ProteinID:
BAA10541
CyanoBase:
sll0088
UniProt:
Q55789
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All DBs
Position
complement(2870696..2871418)
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AA seq
240 aa
AA seq
DB search
MGVVLSVYWTATHRFQNFLLLLLTMTLSSSHSTKEDILCYLLKEGQGSAIAMAEELGISP
QAMRKHLKDLENDGLIEHQQERQSMGRPQFLYQLSKQGREQFPQRYGEFALSFIDSLVET
VGEEQLGAVLKKQWQRKAEAYRQQIGQGPLSKRVHKLVELRRQEGYMAEIHPLSVEQAEK
FILSEHHCAIADVAESYPTVCGHELEMFAAILPDCAIERTHWLNDGEHTCGYLIQSKTPN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgtcctttcagtttactggactgccacgcatcggttccaaaatttccttctc
ctgttgttgaccatgaccctcagttcttcccactccaccaaagaagatatcctctgctat
ctcctcaaagaggggcaaggatcggcgatcgccatggctgaagagttgggcattagtccc
caggccatgcgtaagcacctcaaggatttagaaaatgatggcctaattgagcatcaacag
gaaagacagagcatgggcagaccccaatttctctatcagttgagtaaacaggggcgggaa
caatttccccaacgttacggtgaatttgccctttcgttcatcgactccctggtggaaaca
gtgggggaagaacagttgggggcagtgttgaaaaaacaatggcaacggaaggcggaagcc
tatcgccaacaaattggccagggccccttatccaaaagggtacataaactggtggagcta
cggcggcaggaaggttatatggcggaaattcatcccctttcggtggagcaagcggaaaaa
tttattttgtcggagcaccactgtgcgatcgccgatgtggccgaatcctaccccaccgtt
tgtggccatgagttggaaatgtttgccgctattctgccggactgtgccatcgaaagaacc
cattggcttaatgatggggaacacacctgtggttatttgatccagtctaaaaccccgaac
taa
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