Synechocystis sp. PCC 6803: sll1121
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Entry
sll1121 CDS
T00004
Name
(GenBank) unknown protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syn
Synechocystis sp. PCC 6803
Pathway
syn03420
Nucleotide excision repair
syn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
sll1121
03430 Mismatch repair
sll1121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syn03400
]
sll1121
Enzymes [BR:
syn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
sll1121
DNA repair and recombination proteins [BR:
syn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
sll1121
MMR (mismatch excision repair)
Other MMR factors
sll1121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAA17370
UniProt:
P73339
LinkDB
All DBs
Position
complement(867257..869569)
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AA seq
770 aa
AA seq
DB search
MGRLRGTLTSAIAMNQTSLNLEQLRQSLRSSQRPLADWHGGEMAVSAVPGAGKSHSLSVA
AAIAIAHHGLHNQEKLLIVTYTRSAAAAIKGKVNQRLRALGLPSLGFTVQTLHGLALSIA
LRHPEVSGLDPEQQTLVSPQKGHRLIKDAVEQWRRENPKTYQTLVEAGNFDGETTETLRR
QAVLSTEVLPELTKTVVAEAKSSGLSPQAVADMGRIAPGSELLLMGAGLFKHYQALMEAK
NWIDYNDMILAALRVLEDPHLCRQWQEQFFGVFEDEAQDSSPLQEKLLTKLAQNADGTIR
LIRVGDPNQAINSSFTPADPVYFDQFCQRCQALGSFATMDQAGRSNLQVIAAANFLLEWV
NQDWQARFNSGPKGDATLPFRPQAIRPVEPGDPQPNPPATDGGVEIRFPQDINEEVEQIR
HRLVPLLLANPHHNAAILVRENRQGRFVADRLKDVEKDGGLKVLDVGDQDRNSRIPGEIL
SLLQFIDRPHSPDLLKATLTVLQERQLIPTQDLNALAAVPEQFLYPTPLMPPLASPAVSA
QGLCRSLLKARLELPAYQLIAFLGLALNYDSSDLATLQKLSERLQVQTQPERSLKNLLSE
LHTIANDEQFEAIASDSDEKYTRPGQITIITMHKAKGLDWDYVFLPFLHQDTLPGDLWVP
KGGQFLGQFTLAEVARAQIRTVVHHRQQQKPQAIALPVTATAWQEARRLKEAEEYRLLYV
AMTRAKRLLWLSAAQEGPFAWNQMQARKSPRLQPKQPSQALLALQKRFGS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggtagattgaggggaacactaacgtcggcgatcgccatgaatcaaacttccctgaac
ctagagcaactccgccagagtttacgcagcagtcaacgacctctggcggattggcatggg
ggagagatggccgtttccgccgtgcccggggctggcaaatcccatagtctttctgtggcg
gcggcgatcgccattgcccaccatggtttacataaccaggaaaaattgctgattgtgacc
tacacccgttcagcggcggcggccatcaaaggcaaggttaatcaacgtttacgggccttg
ggcttacccagtttgggatttacggtgcagaccctccacggtttagccctcagcattgcc
ctacgccatccggaagtatcggggctagacccggagcaacagaccctggtttcgccccaa
aaaggccatcgcttgatcaaagatgcggtggaacaatggcggcgggaaaatcctaaaacc
tatcaaaccctggtggaagcgggtaattttgacggggagacaacggaaaccctgcggcgg
caggcggtgctgagcacggaagttttacctgaattaaccaaaactgtggtggcagaagca
aaaagttctggcctctctccccaggctgtggcggacatgggtcgcattgcccccggtagc
gaactcctgctgatgggagccggtttgttcaaacattaccaagccctgatggaggcgaaa
aattggatcgactataacgacatgattttggccgccctgcgggtgctagaagatccccac
ctttgccgccagtggcaggaacaattttttggtgtttttgaagatgaagcccaggactct
agccctctgcaggaaaagttactgaccaagctggcccaaaacgccgatggtaccattcgt
ttaattcgggtgggggaccccaatcaagccattaactctagctttacccccgctgacccc
gtatatttcgatcaattttgccaacggtgccaggctttgggcagtttcgccaccatggac
caggcggggcgcagtaatttacaggtaattgcggcggccaacttcttgctggaatgggtt
aaccaagattggcaagcacggtttaatagtggtcccaaaggggatgcgaccttacccttc
cgcccccaggcaattcgtccagtggaaccgggggacccccaacccaatcctccggccacc
gatgggggagtggaaattcgttttccccaagatatcaatgaagaagtagaacaaattcgc
catcggctagtgcccctgttgttggccaatcctcaccacaatgctgccattttagtacgg
gaaaatcgccagggaaggttcgtggccgatcgcctgaaggatgtggaaaaagatggtgga
ctgaaggttttggacgtgggggaccaggatcgtaattcccgcataccaggggaaatcctt
agtcttttacaatttatcgaccgcccccattcccccgatctcctcaaagccaccttaaca
gtgttgcaggagcgccaactaattcccactcaagatttaaatgctttggcggcggtgccg
gaacaatttctctaccccactcccctgatgcctcccctggcctccccggcggtttctgcc
cagggcctatgtcgtagtttgctcaaagcccgcctggaactgcccgcctatcaattgatt
gcttttttgggtctggccctcaactatgacagctcagatttagccaccttacaaaagttg
tcggaacgtttacaggtacaaacccaacccgaacgctcattaaaaaatttgctcagcgaa
ctccacaccattgccaacgatgaacaatttgaggcgatcgccagcgatagtgatgaaaaa
tacaccagaccggggcaaatcaccattatcaccatgcacaaggccaagggattggattgg
gactatgtgtttttaccctttttgcaccaggacaccctccctggcgatttatgggtaccc
aagggagggcaatttttggggcagtttaccctagcggaggtggccagggcccaaattcgc
accgtggtacaccatcgccaacagcaaaagccccaggcgatcgccctgccggtcacggcc
accgcttggcaagaagcccgccgcctcaaggaagcagaggaataccgactactctacgtc
gctatgaccagggccaagcgtttattgtggctatccgccgcccaggaagggccctttgcc
tggaaccaaatgcaagcccgcaaatccccccgactacaacccaaacaaccatcccaggcc
ctattggccctacaaaagcgttttggttcctag
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