Synechocystis sp. PCC 6803: slr0050
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Entry
slr0050 CDS
T00004
Name
(GenBank) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syn
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syn03016
]
slr0050
Enzymes [BR:
syn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
slr0050
Transfer RNA biogenesis [BR:
syn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
slr0050
Prokaryotic type
slr0050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAA10267
UniProt:
Q55132
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All DBs
Position
2564465..2565445
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AA seq
326 aa
AA seq
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MEITFLGTSSGVPTRNRNVSSIALRLPQRAELWLFDCGEGTQHQFLRSEVKISQLTRIFI
THLHGDHIFGLMGLLASSGLAGSGQGIEIYGPEGLGDYLEACCRFSSTHLGKRLKVHTVR
ENGLIYEDKDFQVHCGLLKHRIPAYGYRVEEKQRPGRFNVEQAEALGIPFGPIYGQLKQG
KTVTLEDGRRIRGQDLCEPPEPGRKFVYCTDTVFCEEAIALAQEADLLVHEATFAHQDAQ
LAFDRLHSTSTMAAQVALLANVKQLIMTHFSPRYAPGNPLQLENLLAEAQAIFPNTRLAR
DFLTVEIPRRTADPAIAMSTPQASPA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattacttttcttggtaccagctccggcgttcccacccgtaaccgcaatgtttcc
agcattgccctccgtttaccccaaagggcggaattgtggttatttgattgcggagaaggc
acccaacaccagtttttgcgcagtgaagtcaaaatttcccaattgacccgcattttcatt
acccatctccacggcgaccacatttttgggctgatgggtttattggctagctccggttta
gctggctccggtcaaggtattgaaatttatggcccagagggcttgggggattatttagaa
gcctgttgccgtttttctagtacccacctgggcaaacgcctcaaagttcacactgtccga
gaaaatgggctaatttacgaagataaggattttcaagtccactgcggtttactaaaacat
cgcattccggcctatgggtatcgagtggaggaaaagcaacggccagggcgtttcaatgtg
gagcaagcggaagctttgggcattccctttggtcctatttacggccagttaaaacaggga
aaaaccgtcaccctggaagatggtcgccgaattcgaggtcaggacctctgtgaaccaccg
gaaccgggccggaaatttgtttactgtactgatacggtcttttgtgaagaggcgatcgcc
ttggcccaggaagcagatttgctggtacatgaagccacttttgcccatcaggatgcccag
ctagcctttgaccggctccattccacttccaccatggcagcccaggtagctttgttggcc
aatgtcaagcagttaatcatgacccatttcagcccccgctatgcccccggcaatcccctg
caactggaaaatctactggcggaagcccaagctatttttcccaatacccgtttggctagg
gattttttaacggtggaaattcctcgccgcacagccgatcctgccatcgcaatgtcaacc
cctcaggcatcccctgcatag
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