Synechocystis sp. PCC 6803: slr1564
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Entry
slr1564 CDS
T00004
Symbol
rpoF
Name
(GenBank) RNA polymerase sigma-37
KO
K03090
RNA polymerase sigma-B factor
Organism
syn
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syn03021
]
slr1564 (rpoF)
Transcription machinery [BR:
syn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
slr1564 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
HTH_Crp_2
HTH_17
DUF134
LacI
SpoIIID
PhyR_sigma-like
KORA
Motif
Other DBs
NCBI-ProteinID:
BAA18703
UniProt:
P74595
LinkDB
All DBs
Position
3371247..3372023
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AA seq
258 aa
AA seq
DB search
MTNATSESLKLETLRLFKIYAESHDIGVRNRIMEVNLGLVRKEAHHWTAQCNESFEDLSQ
VGCLGLIRAIERFDVSKGNAFSSFAIPYVRGEIQHFLRDKSNCVRIPRRWLDLGRQAIAV
QQEFRLKYDRAATDEEIAQILAVPLADWQETKLALQNRELVSLDTKVNGDDEGQVNLGDC
LAHHEFRSFQLSQEDQIRLQQALAGLEERTRRIVEFVFLHDFTHKEAAEMMGVSVITVSR
RIKQGIGALKKALNTEIF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgccaccagcgaaagcctcaaacttgagactctgagactgttcaaaatctac
gcagagtcccacgatattggcgtgcgtaatcggattatggaagtcaatctgggtctggtg
agaaaggaagcgcaccattggacggcccagtgcaatgaaagttttgaggatttgtcccag
gtggggtgtttgggtctgatccgagccattgaacggtttgatgtgagtaagggcaatgcc
tttagctcctttgccattccctatgtgcggggagaaatccagcattttctgcgggataaa
agtaactgtgttcgtattccccggcgttggttagatttgggtcgtcaggcgatcgccgtc
cagcaggaatttcgcctcaaatatgaccgggcggccacggacgaggaaattgcacaaatt
ttagcagtgcccctggcggactggcaggaaaccaaactggcgctgcagaatcgtgaactg
gtgagtttggacaccaaggtaaatggcgacgatgaaggacaagttaatctgggggattgt
ttagcccaccacgaattccgtagttttcaactcagccaggaagatcaaatccgtctgcaa
caggccttagccggtttggaagaacgtacccgccgcattgtggaatttgtttttctccac
gactttacccacaaggaagccgccgaaatgatgggggttagtgtgattaccgtttcccgt
cgcattaaacagggcattggggctctgaaaaaagccttaaatacggaaattttttaa
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