Synechocystis sp. PCC 6803: slr1646
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Entry
slr1646 CDS
T00004
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
syn
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syn03019
]
slr1646 (rnc)
03009 Ribosome biogenesis [BR:
syn03009
]
slr1646 (rnc)
03036 Chromosome and associated proteins [BR:
syn03036
]
slr1646 (rnc)
Enzymes [BR:
syn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
slr1646 (rnc)
Messenger RNA biogenesis [BR:
syn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
slr1646 (rnc)
Ribosome biogenesis [BR:
syn03009
]
Eukaryotic type
90S particles
RNase
slr1646 (rnc)
Prokaryotic type
rRNA processing factors
slr1646 (rnc)
Chromosome and associated proteins [BR:
syn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
slr1646 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAA18463
CyanoBase:
slr1646
UniProt:
P74368
LinkDB
All DBs
Position
2071379..2072074
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AA seq
231 aa
AA seq
DB search
MNHPDFPPIGDPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHF
TEAELTRLRSQLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAA
LLDRGLTAVEDFIQELFVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYE
LINTSGPPHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKSLGLLQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatcccgatttcccccccatcggggacccccagttaaaactcgaagccctcacc
catcgttcctattgcaacgaacatcctggtactccttcctatgaccggctggaatttctt
ggggatgcggtgttgggttttgtggtggggcgcattctttttgaacgttatccccatttt
actgaggcagagttaacccgtctgcggtcccagttggttaatcaaaatcagttggcctat
ctagcgaggtttttacacattgcgccggaaattcgcctgagccaaagtttggccagggac
gatggacaatccagcccttccatcctggccgatgtttttgaatcattgttgggggcggct
ctcctggataggggtttgacggcggtggaagatttcattcaagaactattcgttcccatc
ctagagcagtgggaaaaaagccaggatgggcgatcgccaaaactagtgccgaccatggat
gtaaaaagcatgctccagcagtgggccttggccaaaactaaacaattgccagaatatgaa
ctaatcaacaccagtgggccaccccatgcccaggaatttacctttaccgtcaaagtagcg
ggaaaaatccatggccaaggctctggccccagtaagcaaattgccaccaaacaggcagcc
ctagaggcattgaaaagtttggggctattgcaataa
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