Synechocystis sp. PCC 6803: slr1844
Help
Entry
slr1844 CDS
T00004
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
syn
Synechocystis sp. PCC 6803
Pathway
syn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
slr1844 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syn03400
]
slr1844 (uvrA)
DNA repair and recombination proteins [BR:
syn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
slr1844 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
slr1844 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_23
NACHT
AAA_21
AAA_22
AAA_33
AAA_18
nSTAND3
AAA_25
Viral_helicase1
DnaJ_CXXCXGXG
RNA_helicase
cobW
MeaB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAA17452
UniProt:
P73412
LinkDB
All DBs
Position
962888..965800
Genome browser
AA seq
970 aa
AA seq
DB search
MPEQNSIRIRGARQHNLKNVNLDLPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESL
SAYARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGS
PHCPHCQRNIAPQTIDQMCDRVMELPDRTKFQILAPVVKGKKGTHVQLLSSLVSQGFVRV
RINGEVRELSDNIELKKNQAHTIEIVIDRLIKKEGLQERLVDSLSTCLKQAEGTAIIDIL
DKPTLAVLDGGKKDDKEALKAAENGQAYHAELPKEIIFSENFACPEHGAVMDELSPRLFS
FNSPYGACPDCHGIGFVRSFCPDLVIPDPEKPVYVAIAPWSEKDNSYYLSLLYSLGQHFD
FQLQTPWKKLTKEQKEIILYGTEEEIWFEGESRYRNKQGYYRRFAGALNILQKNYDETNS
DAIKQKLEKYIINQPCHTCGGKRLKPEALAVKLGQYNINNLTSVPIRQTLERIENLELTS
RQAMIGELALKEIKARLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLY
VLDEPSIGLHQRDNNRLLATLTKLRDLGNTLIVVEHDEDTIRHADYIVDIGPKAGIHGGE
IVCQGDFQTLLKNQRSLTGAYLSGREAIATPEERRNGNGAKLTLQGCCHNNLRNIDVTIP
LGKLVCVTGVSGSGKSTLVNELLHPALQHYLSRQVAFPKNLGEITGLQAIDKVIVIDQSP
IGRTPRSNPATYTGIFDSIREIFTQTIEAKARGYKPGQFSFNVKGGRCEACAGQGVNVIE
MNFLPDVYVQCDVCKGARYNRETLQVKYKGHSIADVLAMTTEEALTVFENIPRAVNRLQT
LVDVGLGYIKLGQPAPTLSGGEAQRVKLASELSRRATGKTLYLIDEPTTGLSFYDVHHLL
NVLQRLVDKGNSVLVIEHNLDVIRCSDWIIDLGPEGGDRGGKIMVAGTPETVAQHPSSYT
GKYLAKVLQS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacaaaatagcatccgtattcgaggcgctagacaacataacctaaaaaatgtg
aatctagacctgccccgcgatcgcctgattgtgtttacgggggtgtcggggtcaggcaaa
tcttccctagcttttgacactatctttgcagagggacaacggcgttatgtggaatccctc
agtgcttacgcccgacagtttttggggcagttggataagcctgatgtggacagcatcgaa
gggttgagtccggctatttccatcgatcagaaatccacttcccacaatccccgctccacc
gtgggtacggtaacggaaatttacgactacctccgtctgttatttggcagggctggcagt
ccccattgtccccactgccaacggaatattgccccccaaaccattgaccaaatgtgtgat
cgggtgatggagttaccggacagaactaagtttcaaattcttgctccggtggtaaagggc
aaaaaagggacccatgtgcaactactttctagcttagtttcccaaggctttgtgcgggta
agaattaacggcgaagtgcgagaattaagtgacaatattgaattaaaaaagaaccaagcc
cacaccattgaaatagttattgatcgcctgatcaaaaaagaaggtttacaggaacgattg
gtagactcactcagtacttgtttgaagcaagcagaaggcaccgccattattgacattttg
gacaagccaacgctggcagtgttagatggaggtaaaaaagacgacaaagaagcattaaaa
gcggcagaaaacggccaggcttaccatgcagagttacccaaggaaattatcttttcagaa
aactttgcctgtccagaacatggggcggtgatggatgaactttccccccgcttattttct
ttcaactccccctacggtgcttgtcccgattgccatggaattggctttgtgcggtctttt
tgcccagatttggtcattcctgatcccgaaaaaccagtgtatgtggcgatcgccccctgg
tcagaaaaagataattcctattacttgtcgttactgtacagtttaggacagcattttgat
tttcagttacaaactccctggaaaaagctaaccaaagagcaaaaggaaataattttatac
ggcacagaagaagaaatttggtttgaaggggaatcccgttaccgcaataaacaaggttat
tatcgtcgttttgctggagcattaaatatcctgcaaaaaaattatgatgaaaccaattcc
gatgccattaagcaaaagttagaaaaatatattattaatcaaccctgtcacacctgtggc
ggcaaaaggttaaagccagaagcattagcagtaaaactagggcagtacaacattaacaat
ttaaccagtgtgcccatccgccagaccctggaacggattgaaaatctagagttgacttcc
cggcaagccatgattggggaattggcgttaaaggaaatcaaagcccgtttgcaatttctc
ctggacgtaggtttggattatctgaccctcgaccgggccgccatgactctatctggcgga
gaagcccaacggattcgcctggccacccaaattggttccggtctcaccggagttttatac
gttttggatgaaccaagcattggtttgcatcaacgggacaacaatcgcctgttggccact
ctgactaagttaagggatctgggcaatacgttaattgtggtggagcatgatgaagatact
atccgccacgccgattatattgttgacattggtccgaaggcgggcatccatggtggagaa
attgtctgtcagggggattttcagactctactaaaaaatcaaaggtctcttactggggct
tacctatccggtcgggaggcgatcgccactccggaggaacggagaaatggcaacggagcc
aagttaaccctccaaggttgttgccataataatttgcgtaatattgatgtgaccattccc
ctgggcaaactggtgtgtgttacaggggtatccggttccggcaagtccaccctagtcaat
gaattgctccatccggctctgcaacattatctttctcgccaagtagcttttcccaagaat
ttaggggaaatcaccggcctccaggcgatcgataaagtcattgtcattgaccaatccccc
attggccgcactccccgctccaaccccgccacctatacaggtatttttgactccattcga
gaaattttcacccaaaccattgaagctaaagctaggggttataagccgggacaattttct
ttcaacgtcaaagggggacgctgtgaagcctgcgctggtcagggagttaacgtgattgaa
atgaattttttgcccgatgtgtatgtgcaatgtgatgtgtgcaaaggagccagatataac
cgggaaacgttgcaggtgaagtataaaggtcattccattgccgatgtgttggccatgacc
accgaggaagccctgacagtgtttgagaatattcccagggcagtaaatcgcctgcaaacc
ttggtagatgtgggtttgggttacatcaaactgggtcaaccggcccccactttatccggg
ggagaagcccaacgggtcaaactagcttccgagttatctcgccgggccacgggcaaaact
ttgtatttaattgatgaacccaccaccgggctatctttttatgatgtccaccatttgctc
aacgttttgcaaagactagtggataaaggcaattctgttttagtcattgaacataacctg
gatgtaatccgctgtagcgattggattattgatctgggccccgaaggtggcgatcggggt
ggaaaaattatggttgcaggaaccccggaaacagtggcgcaacatccaagttcttacaca
gggaaatatttagcgaaggtattgcaatcttaa
DBGET
integrated database retrieval system
