Synechocystis sp. PCC 6803: slr1942
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Entry
slr1942 CDS
T00004
Name
(GenBank) PCC7942 clock gene...ORFF
KO
K08482
circadian clock protein KaiC
Organism
syn
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syn00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
slr1942
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
MEDS
DnaB_C
PAXNEB
AAA_16
RecA
AAA_14
TrwB_AAD_bind
AAA_7
ResIII
AAA_22
AAA_19
NPHP3_N
T2SSE
AAA_24
Rad51
AAA_30
SRP54
Motif
Other DBs
NCBI-ProteinID:
BAA18607
UniProt:
P74503
LinkDB
All DBs
Position
2243851..2245368
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AA seq
505 aa
AA seq
DB search
MIDQETDGIEKLETGIPGFDFLSDGGLPLGRATLIAGTAGSAKTIFASQFLVEGIQRGEN
GVFVTFEEPPKALRKNMRGFGWDIQQWENEGKWVFVDASPQPGDRPIVSGEYDLGALIAR
IEHAVRKYKASRISLDSLGAIFSHLSDSAQVRSDLFRLASALRELGVTAIMTAERVEEYG
EISRYGVEEFVADNVVIVRNVLADEKRRRTIEILKYRGTDHQKGEFPFTIINKKGIVIIP
LSAIELEQKSSDIRITSGSEELDRMCGSGFFRDSIILVSGATGTGKTLMVTEFMDGGVAN
GERCLVFAFEESREQLIRNATGWGVDFKQMEKEGKLKVVCRYPETTNLENHLIMMKDIIQ
EFKPNRVAVDSLSALERVSTLKSFREFIIGLTSFIKQQEIGGLFTSTTPNLLGGASITDA
HISTITDSIILLRYVEMYGEMRRGITVLKMRGSMHDKDIREFSIDHQGMHIGKPFRNVTG
ILAGTPMYTAQSEVERLSGLFDEKI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccaagagacagatggcattgagaagttggagacgggtattccaggctttgat
tttctgtccgacggtggtctccccctcggccgcgccaccctaattgccggcacagcaggt
agtgctaaaactatttttgcttcccaatttttagtcgaaggtattcagcggggggaaaac
ggtgtttttgtcacttttgaggaaccccccaaggccctacggaaaaatatgcggggtttt
ggttgggatattcaacaatgggaaaacgaaggtaaatgggtttttgtcgatgcttccccc
caaccaggcgatcgccccattgtcagcggtgaatatgacctaggggccttgattgcccgc
attgaacacgctgtccgtaaatataaagccagtcgcatttccctcgattccctgggggca
atttttagtcacctcagtgacagtgcccaggtgcgcagtgacctattccgcttggcctct
gccctccgggaactgggagtcaccgccattatgaccgccgaacgggtggaagaatacggt
gaaattagccgttacggagtggaagaatttgttgctgataacgtggtcattgtccgcaac
gtcctcgccgatgaaaaacgtcgtcgcaccatcgagatccttaaataccgtggcaccgac
caccaaaagggcgaatttcccttcactatcattaataaaaaaggcatcgtcatcattccc
ctgtcggcgatcgagctggagcaaaaatcctccgacatccgcatcacctccggcagtgaa
gaattagaccgcatgtgtggcagtggcttcttccgggattcgattattttagtctccggg
gcaacgggtactggtaaaaccctgatggtgacggagtttatggacggcggcgtggccaat
ggagagcgctgtttagtttttgcctttgaggaaagtcgagaacaattaattcgcaatgcc
accggctggggggtagatttcaaacaaatggaaaaggaaggcaaactaaaagtggtttgt
cgctatccagaaaccaccaacttggaaaaccacctgatcatgatgaaggatattatccaa
gaatttaagcccaatcgggtggcggtggacagtctttctgccctagaacgggtttccacc
ctaaaaagttttcgcgaatttattattggcttaacttcctttattaaacaacaggaaatt
ggtggtttattcacttccactacccccaatttactagggggagcttccattaccgatgcc
catatttccaccattaccgattcgattattcttttgcgttacgtggaaatgtatggcgaa
atgcgccggggaattacggtgctaaagatgcggggttctatgcacgacaaagatatccgg
gaattttccattgaccatcaagggatgcacattggtaaacctttccgtaatgtcaccggc
attctggccgggacccccatgtacacagcccagagtgaggtggaaagattgagcggttta
ttcgatgagaaaatatag
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