Synechococcus sp. CB0101: CB0101_01245
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Entry
CB0101_01245 CDS
T06409
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CB0101_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sync03021
]
CB0101_01245
Transcription machinery [BR:
sync03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CB0101_01245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_29
Sigma70_r4
HTH_3
HTH_8
HTH_10
HTH_28
HTH_30
HTH_24
Sigma70_r3
HTH_1
MarR_2
HTH_Tnp_ISL3
GerE
CENP-B_N
HTH_7
HTH_20
KORA
Motif
Other DBs
NCBI-ProteinID:
QCH13740
LinkDB
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Position
222586..223425
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AA seq
279 aa
AA seq
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MAAQDSTRAWLDAVGRLPQGSSRLVISRGQQIRAADDPQATPAQRRAAARARSRMIKENL
RLVVCIAKPYHARIQRSSALEFSDLLQAGTIGLIRAVEKFDPALGYSFSTYASWWIRQAI
RREIEASESSIRLSARQQQMRLKAHFAPPGLSHDELAEYLGVEPRQLKELQEAWRASQVD
SLDRPIEMGNDQLKLSDSLAAPLNRSLDHQDLQDVAARFRRKAPSEIAVFDRLAQGESQS
EVARSMGITRQALNRRLERASKRLRLVDPSARELLADLA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaagacagcacccgcgcctggctcgatgccgtcggccgcttgccccaggga
tcgtcgcggctggtgatcagccgcggccagcagattcgggcggccgacgatccccaggcc
accccagcccagcgccgtgcggctgccagggcacgcagccgcatgatcaaagagaacctc
cgcctggtggtgtgtattgcgaagccctatcacgctcgcattcagagaagttcagcgctt
gagttttcggatctgcttcaggccggcacgatcggtctgattcgtgccgtggagaaattt
gaccccgccttgggctattccttttccacctatgccagctggtggattcgccaggcgatt
cgccgtgagattgaggcgagcgagagttccatccgcctctcagcacgtcagcaacagatg
cggctcaaagcccactttgcgccgccgggcctgagccacgatgaactggctgagtatctg
ggtgtggagccgcgccagctgaaggagctgcaggaggcctggcgtgcatcgcaggtggat
agtctcgatcgcccgatcgagatggggaacgaccagctcaagttgagtgattctcttgcg
gcgcccctgaatcgttcgctggatcatcaggatctgcaggatgtcgctgcgcggtttcgc
cgcaaagcacccagtgagatcgccgtattcgatcggttggcgcagggcgaaagccagagt
gaggtggcccgcagcatgggcatcacccgtcaggcattgaatcgccgcttggagcgggcc
agcaaacgtctccgcttggtggatccttctgcccgcgagttgctcgccgatctggcctga
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