KEGG   Synechococcus sp. CB0101: CB0101_02170
Entry
CB0101_02170      CDS       T06409                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sync  Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:sync00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sync03400]
    CB0101_02170
Enzymes [BR:sync01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CB0101_02170
    5.6.2.6  RNA 3'-5' helicase
     CB0101_02170
DNA repair and recombination proteins [BR:sync03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CB0101_02170
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QCH13894
LinkDB
Position
complement(385706..388192)
AA seq 828 aa
MSERLAPIEAWFTQQGWTPMAFQRQCWQAHLNGDSGLLQVPTGSGKTYAAVMGPIAEMLA
APGGLQLLVITPLRALSRDLALAIEQPISAMGWPLRVAIRNGDTSTHERSKQLRKPPEIL
ITTPESLSVLLANAKAPELFAHLQAVVLDEWHELMGSKRGTQTELCLSWLRRLRPQLRTW
AISATIGNLEEAAQAAVGVGAAPPQIITADIQRATEIRSLLPDTIDGFPWGGHLGLRMYE
ELVAGLEPGVSTLLFTNTRNQAERWHQCLRFACPEMDGALALHHSAIDRAEREAIEAQVK
AGELRWVVCTSSLDLGVDFQPVERVVQIGSAKNLARLLQRAGRSAHCPGGTSQVLFMPTN
ALELLEVSAMRRGLENGLVEHRRPPQLPLDVLLQHLTSLACGAGLIPEQELATVRQSWSF
RQLSDAQWRWCLAFLEHGGDCLAAYPRYRKLVRCRLDSDEAPAEGEPWRYRVLDKTIARL
HRFNIGTITADRSVTVRFVRGAVIGHVEEAFIGRLKPGDVFFFAGRQLEFVRLREMTAQV
KATTKKSATVPAWAGGQMALSDLLSRHLRHEVDRCAQALAGEARLDTPELQALEPLLERQ
ANLSGLPRSDQLLVELCKSREGSHLFVYPFEGRFVHEGIGFLWAWRLARHKASTITVSVN
DYGFELLAPKTYPFEDLLDLHGDDLLDLEHLESDLEQALNFSELCRRRFRAIAQVSGLIS
QAMPGQNKTGGQLQISAALLFDVFQKHEPGSLLLEQARREVLDEQLEQHRLRSALERLAG
STWRVERIARPGPLAFPLLVERLNSRLSNESLLDRVQRLIQEATRAEA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgagcgagcggctggccccgatcgaagcctggtttacccagcagggctggacaccgatg
gccttccagcggcagtgctggcaggcgcacctcaacggggacagcggcctgctgcaagtg
ccgacgggctcgggcaagacctacgccgccgtgatgggcccgatcgccgaaatgctggca
gcgccagggggcctgcagttgctggtgatcaccccgctgcgggcgctgagccgcgatcta
gccctggcgatcgagcaaccaatcagcgccatgggctggcccctgcgggtggcgatccgc
aacggcgacaccagcacccatgaacgcagcaagcaactgcgcaaaccgcccgaaatcctg
atcacaacgccggaatcgctgagtgtgctgctggccaatgccaaggcaccggagttgttt
gcgcacctgcaggccgtggtgctcgacgaatggcacgagctgatgggcagcaaacgcggc
acccaaaccgagctctgcctgagctggttgcggcggcttcgaccgcaactgcgcacctgg
gcgatcagcgccaccatcggcaacctcgaggaggcggcccaggcggccgtgggcgttggc
gcggcgccgccgcagatcatcaccgccgacatccagcgggccactgagatccgttcgctg
ctccccgacacgatcgatggcttcccctggggcgggcacttgggcctgcgcatgtatgag
gaactggtggctggcctcgagccgggggtgagcaccctgctgttcaccaacacccgcaac
caagcggaacgttggcatcagtgcctgcgctttgcttgcccggaaatggacggagccctg
gcgctgcaccacagcgccatcgaccgggccgagcgcgaagcgatcgaagcgcaggtgaag
gccggagaactgcgctgggtggtgtgcaccagctccctggatctaggggtggattttcag
cccgtggaacgggtggtgcagatcggcagcgccaaaaacctggcccggctgctgcaacgg
gccggccgcagcgcccactgccccggcggcacctcccaggtgctgttcatgccaaccaat
gccctcgaattgctggaggtgagcgcgatgcgccggggccttgagaacggactcgtggag
caccgccgcccgccccagctaccgctcgatgtgctgttgcagcacctcaccagcctggcc
tgtggagcggggttgatcccggagcaggagttggccacggtgcgccagagctggagcttc
cgccagctcagcgacgcgcaatggcggtggtgcctggcctttctcgagcacggcggtgac
tgcctggcggcctatccccgctaccgcaaactcgtgcgctgccgactcgacagcgacgaa
gcgcccgccgagggtgagccctggcgctaccgggtgctcgacaaaacgatcgcgcgcttg
catcgcttcaacatcggcacgatcacagccgatcgctccgtcacggtgcgcttcgtgcgc
ggggccgtgatcggccatgtggaagaagcgttcatcgggcggctgaaacccggggatgtg
ttcttcttcgccggccggcagctggagtttgtgcggctgcgggagatgacggcccaggtg
aaagccaccaccaaaaagagcgccacggtgcccgcctgggctgggggccagatggccctc
tccgatctcctcagccgccatctgcggcacgaagtggatcggtgtgcccaagcactagcc
ggcgaagcccggctcgacacaccggaactgcaggcgctcgaaccgctgctggagcggcag
gccaacctctccggcttgccccgcagcgatcaactgctggtggagctgtgcaaaagccgc
gaaggcagccatctgtttgtgtatcccttcgaaggcaggtttgtgcacgaggggatcggc
ttcctctgggcctggcgcctcgccagacacaaagccagcacgatcaccgtgtcggtgaac
gactacggctttgaactgctggcgccgaagacctatccctttgaggacttgctcgatctc
cacggcgacgacctgctggatctcgagcacctcgaatccgatctcgagcaggcgctgaac
ttctctgagctctgccggcgccgcttcagggccattgcccaggtgagcggactgatcagc
caggcgatgcccggccagaacaaaaccggtggccaattgcagatcagcgccgctcttctc
tttgacgtgtttcagaaacatgagccggggagcctgctgctggaacaggcgcggcgtgaa
gtgctcgacgaacaactcgagcagcaccgcctgcgttcagccctcgagcgcctggcgggc
agtacttggcgagtggaacgaatcgcccgcccagggcccctggccttcccgttgctggtg
gaacgactcaacagccgcctcagcaatgaatcactgctggatcgggtgcagcgactgatt
caggaagccacccgtgccgaggcctga

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