Synechococcus sp. CB0101: CB0101_02890
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Entry
CB0101_02890 CDS
T06409
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sync03016
]
CB0101_02890
Enzymes [BR:
sync01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CB0101_02890
Transfer RNA biogenesis [BR:
sync03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CB0101_02890
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QCH16112
UniProt:
A0A4P7ZW83
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All DBs
Position
526071..528008
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AA seq
645 aa
AA seq
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MRIGFDAKPSVLPQRQLELICPLPSGVDAPQRLGALPWALTPDQLEQAGLTRRSWGAAWL
LLLESGETLGIGDFADLVCGGTSAAQLAACWLELVGPQAWFRFKQGQIEARSAAELKPMR
RERRLKQLQEQRQQEWQQLLRARQPVDLAVLPLEQQQRLESLKQLAAGALELDQLEPELR
QSLTALHLGHDRGDLRHLLVDLGLWDRHHLVSMGGTTWSLGFSAELEDEAQRLLTLHTED
LPGDGERLDLTAQRCVTIDDDDTRDIDDGLALERRADGSLRLWIHVADPGRLVAVDSPLD
LEARRRGSSLYLASGNLPMFPLCLTTGPFSLRAGMRSAAWSTWVDLDHEGDIAAYGIQRS
WVKPTYRLSYSDADDLIDLAPPEERDLAELDQLLDRRRQWRVRQGALLMDLPEGRIRSHD
GEPTLEISEPSPSRAMVAEAMILAGAVAARFGVEHGLALPFRSQLPADLPPKAELDALPD
GAVRFAAIKRCLSRGLMGTQASPHFSLGLPAYAQATSPIRRYGDLVVQRQIQAQLSGASP
LSEDDLQELLNSFDGAVREGIGISREDQRHWQQVWFEAHKTSQWRADFLRWLRPQDRLGL
VRIDDLAIDLAAECPQNAQPGEALLLRVQQVDSLRDQLKLVALAS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcatcggctttgacgccaagccatccgttttgccccagcgccagctggagttgatc
tgccccctgccctccggtgttgatgcaccgcagcggttgggggctttgccttgggcactc
acgcccgaccaactcgagcaagccggtctcacgaggcgcagctggggcgcagcctggctc
ttactactcgagtcgggcgagacgcttgggatcggtgatttcgcggatctggtctgcggt
ggaacctcagcagctcagttagccgcctgttggctggagctggtgggtccgcaggcgtgg
ttccgcttcaagcaagggcagatcgaggcccgaagcgccgccgagctcaagccgatgcgg
cgcgagcggcggctgaagcaattgcaggagcagcgccaacaggaatggcagcagttgctt
cgtgccaggcagcccgtggatctggctgtgttgccgctggagcaacaacaacggctcgaa
tcgctgaaacaactggcggccggtgcgctggagctggatcagctcgagcctgagctgcgc
caaagcctcacggccctgcatctcggccacgaccgtggtgatctgcggcatctgttggtg
gatctcggtctttgggaccgtcaccacctggtgtcgatgggtggcaccacctggagcctg
ggcttcagcgccgagttggaggacgaagcccagcgcctgctgacgctgcacaccgaagac
ctccccggtgatggcgaacgcctcgatctcacagcccagcgctgcgtgacgatcgacgac
gacgacacccgcgacatcgacgacggcctggctttggaacgccgggccgacggcagcctg
cgcctctggattcatgtggctgatccaggccgcctggtggccgtggattcaccgctcgat
ctggaggcacgccggcgcggcagcagcctctacttggccagcggcaatctgccgatgttc
ccgctctgtctcaccacggggcccttcagcctgcgggcggggatgcgcagcgccgcctgg
agcacctgggttgaccttgatcacgagggagacattgccgcctacggcattcagcgcagc
tgggtgaagcccacctatcggctcagctacagcgatgccgatgatttgatcgacctggcg
ccgccagaagagcgggatctcgctgagctggatcagttgctggaccgccgccgtcagtgg
cgcgtgcgccagggcgccctgctgatggacctgccggaagggcgcatccgcagccatgat
ggcgagccgaccctcgagatcagcgagcccagcccctctcgcgcgatggtggctgaggcg
atgatcctggctggtgcggtcgcggcacgttttggcgttgagcacggcttggcgctgccc
ttccgcagccaactcccagccgacttaccacccaaagcagagctcgacgcacttcccgat
ggcgccgtgcgctttgccgcgatcaagcgctgcctcagccgcgggttgatgggaacccag
gcttcgccccacttcagcctcgggctgccggcctatgcccaggccacctcgccgatccgg
cgttacggcgatctggtggtgcagcgccagattcaggcgcagctcagcggggcatcaccc
ctgagtgaagacgacctgcaggagttactcaacagcttcgatggcgccgtgcgcgaaggc
atcggcatctcccgcgaagaccagcgccactggcagcaggtgtggtttgaagcccataag
accagccaatggcgcgccgatttcctgcgctggctccggccccaggaccggctcggcctg
gtgcgcatcgacgacctggccatagacctggccgccgaatgcccccagaacgcccagcca
ggcgaagcgctgctgctgcgggtgcagcaggtggattcgctgcgcgatcagttgaagctg
gtggcgttagccagttga
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