Synechococcus sp. CB0101: CB0101_03605
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Entry
CB0101_03605 CDS
T06409
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sync
Synechococcus sp. CB0101
Pathway
sync03030
DNA replication
sync03430
Mismatch repair
sync03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CB0101_03605
03430 Mismatch repair
CB0101_03605
03440 Homologous recombination
CB0101_03605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sync03032
]
CB0101_03605
03400 DNA repair and recombination proteins [BR:
sync03400
]
CB0101_03605
Enzymes [BR:
sync01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CB0101_03605
DNA replication proteins [BR:
sync03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CB0101_03605
DNA repair and recombination proteins [BR:
sync03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CB0101_03605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QCH14127
LinkDB
All DBs
Position
complement(653672..654586)
Genome browser
AA seq
304 aa
AA seq
DB search
MAPAEPLQPWEQVDLLSLMQAPVAASPQAPPEPDRPEPVAELQPESEPESKSAPEPQSAP
EPLPEIPAPLVPQRLLILDTETTGLDPQRDRCIELGAVLFDVPRRSVLSQVSLLLPCEQN
PAQAVNGIDPRLTQQPQPWQQGLQWFEALLAASDVVVAHNAAFDRQWFGIAPLPAIDKPW
LCSMEDIRWPADRHLRSNPSVRDLALAYSVPVWAAHRALTDCIYLAQVFERCSDLEPLLQ
QGLEPRRLYRARLSYEERHKAREAGFRWNEPVSGAWSRRLSEREAALLTFPVVPVEGDQQ
RRSA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgaacctctgcaaccctgggagcaggtggacctgttgagcctgatgcag
gctccggttgcggcatcgcctcaggctcctcctgagccggatcggccggagccggttgct
gagctccagcccgagtccgagccggaatccaagtcagcgcctgaaccccagtcagcgcct
gagcctctgcctgaaatccctgcacctctggtgccccagcggctgttgatcctcgacacc
gaaaccaccggcctcgaccctcagcgtgatcgctgcatcgagctgggggccgtgctcttt
gatgtgccccgccgttccgtgctgagccaggtgtcgttgctgctcccctgcgagcaaaac
ccagcccaggcggtgaacgggattgatccacggctcacgcagcagcctcagccctggcaa
cagggcttgcagtggtttgaggcactgctggccgcttcagatgtggtggtggcccacaac
gcggcttttgatcgccaatggttcggcatcgctccgttgcccgcgatcgacaagccttgg
ctgtgctccatggaggacatccgctggccggcggatcgccacctgcgctcgaatccatcg
gtgcgggatctggcgcttgcttacagcgtgccggtgtgggccgcccaccgcgccctcacc
gactgcatatatctggctcaggtgtttgagcgctgcagcgatctcgagccgctgctgcaa
cagggcctggagccgcggcggctctaccgcgcacgcttgtcgtatgaggagcgccataag
gcccgtgaagccggcttccgctggaacgagcccgtgagtggggcttggagccgtcgcttg
tcggagcgggaggcggcgttgttgaccttcccggtggtgcctgtggagggtgatcagcag
cgccgttcggcctag
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