Synechococcus sp. CB0101: CB0101_07030
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Entry
CB0101_07030 CDS
T06409
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sync
Synechococcus sp. CB0101
Pathway
sync03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CB0101_07030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sync03021
]
CB0101_07030
03400 DNA repair and recombination proteins [BR:
sync03400
]
CB0101_07030
Enzymes [BR:
sync01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CB0101_07030
Transcription machinery [BR:
sync03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CB0101_07030
DNA repair and recombination proteins [BR:
sync03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CB0101_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
DUF7337
DUF333
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
QCH14708
UniProt:
A0A4P7ZVM4
LinkDB
All DBs
Position
complement(1293765..1295669)
Genome browser
AA seq
634 aa
AA seq
DB search
MTNSNLRTENHFDYVKITLASPERVMQWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDAGDHKDLTYKQLLTEDEWLEIEDEIYAE
DSEIENEPTVGIGAEALKQLLEDLDLPVVAEQLREEIAGSKGQKRAKLIKRLRVIDNFIA
TSARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVM
QVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIEAQTEARMLMLASNNILSPATGEPIITPSQDMVLGSYYLTAVQPDGVKPEFGDRS
RTFAGLRDVLAAFDEKHLTMHDWVWVRFNGEVDSEDEAKEPIKEETLSDGTRIEQWNYRR
DRLDEDGALISRYLLTTVGRVVMNSTIIDAVAAA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagcaatctccgcaccgagaaccacttcgactacgtcaagatcacccttgct
tcgccggagcgggtgatgcagtgggggcagcgcacgctgcccaatggtcaggtggtgggc
gaggtgaccaagcccgaaaccatcaactaccgcacgctcaagccggaaatggacggcttg
ttctgcgaaaagatctttggcccttccaaagactgggagtgccattgcggtaagtacaag
cgggtgcggcaccgcggcatcgtgtgcgagcgctgcggcgtggaggtcacggagagccgg
gtgcggcgtcaccgcatgggcttcatcaagctggcggcccccgtgtcgcacgtttggtac
ctgaagggcatccccagctatgtggcgatcctgctcgacatgcccctgcgggatgtggag
cagatcgtttacttcaactgctatgtggtgctcgatgcgggcgaccacaaagacctcacc
tacaagcagctgctcaccgaagacgagtggctggagattgaagatgagatctacgccgaa
gactcggagatcgagaacgagcccaccgtgggtatcggtgctgaagcactgaagcaactg
ctggaggatctcgatctgcccgtggtggctgagcagctgcgcgaggagatcgccggctcc
aagggccagaagcgcgccaagttgatcaagcgcctgcgcgtgatcgataacttcatcgcc
accagcgcccgtcctgagtggatggtgctggatgtgatcccggtgatcccgcccgatctg
cgcccgatggtgcagctcgatggcggccgtttcgccacctccgacctcaacgatctctat
cgccgtgtgatcaaccggaacaaccggttggcgcgtctgcaggagatcctggcccccgaa
atcatcgtccgcaacgagaagcggatgctgcaggaggccgttgacgccctgatcgacaac
ggtcgccgcggccgcaccgtggtgggcgccaacaaccgcccgctcaagtcactgagcgac
atcattgagggcaagcagggtcgcttccgtcagaacctgctcggtaagcgcgtcgattac
tccggtcgttccgtgatcgtggtgggtccgaagctgaagatgcatcagtgcggtctgccc
aaggagatggcgatcgagctgttccagccgttcgtgatccatcgcctgatccgccagaac
atcgttaacaacatcaaggccgccaagaagctgattcagcgcgccgatgatgaggtgatg
caggtgctgcaggaggtgatcgaaggtcacccgatcctgctgaaccgtgctccgacgctg
caccgcctcggcattcaggcgttcgagcccaagttggtggatggccgcgccattcagctg
cacccgctggtctgccccgccttcaacgccgacttcgacggtgaccagatggctgtgcac
gtgcccctggcgattgaggcccagaccgaggcccgcatgctgatgctcgccagcaacaac
atcctctcgcccgccacgggcgaaccgatcatcaccccctcccaggacatggtgctcggt
tcctactacctcaccgctgtccagcccgacggcgtgaagcctgagttcggtgatcgcagc
cgcacctttgctggtctgcgcgacgtgcttgcggccttcgatgagaagcacctcaccatg
cacgactgggtgtgggtgcgcttcaacggtgaagtggatagcgaagacgaagccaaggag
cccatcaaggaagaaaccctgagcgatggcacccgcatcgagcagtggaactatcgccgc
gatcgtttggatgaagacggcgctctgatcagccgctacctactcaccaccgtcggccgt
gtggtgatgaacagcacgatcatcgacgcggtggccgccgcctga
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