Synechococcus sp. CB0101: CB0101_09410
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Entry
CB0101_09410 CDS
T06409
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sync
Synechococcus sp. CB0101
Pathway
sync03420
Nucleotide excision repair
sync03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CB0101_09410
03430 Mismatch repair
CB0101_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sync03400
]
CB0101_09410
Enzymes [BR:
sync01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CB0101_09410
DNA repair and recombination proteins [BR:
sync03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CB0101_09410
MMR (mismatch excision repair)
Other MMR factors
CB0101_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QCH15121
LinkDB
All DBs
Position
1766645..1769053
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AA seq
802 aa
AA seq
DB search
MAQGFLAGLNDAQRRAVDHHVGPLLVVAGAGSGKTRALTHRIAHLIGQHGVDPAELLAVT
FTNKAAREMKERLELLLAQKLAQSQFGQPWSTLPAVEQRQLRSRIYRDVIKDLWIGTFHA
LFARLLRFDIDKFRDPEGLTWTRQFSIYDEGDTQSLVKEIVTQELGLDPKRFEPKKVRWA
ISNAKNQGWIPEQLEADAGGQRGKLMAETYRRYRRALAANNALDFDDLLLLPVQLLRQND
EVRHYWHRRFKHVLVDEYQDTNRTQYELIKLLVADGRDPADFGEWQGRSVFVVGDADQSI
YSFRAADFTILMGFQEDFGDGAPDDATRTMVKLEENYRSTATILEAANALISNNTERIDK
VLRPTRGDGELITLTRCDDEIAEAEAVVHRMRMLEAANPDLGWRDMAVLYRTNAQSRAME
ESLVRWGIPYVVVGGLRFYDRREIKDILGYLKLLVNPADTVSLLRVLNTPKRGIGKTTIE
RLSDASNQLGIPLWDVVSDPEAVRSLGGRSAKGLLQFSELIRSLQARAETAPPSELVQVV
MEQSGYVAELIAAGTDEAEDRRRNLNELVNAALQYQEENEEGSLDDFLASAALASDADSK
DTEQDRVTLMTLHASKGLEFPVVFLVGLEQGLFPSYRSLDDPAAMEEERRLCYVGITRAK
ERLFLSHASERRLWGGMREPAVPSVFLSELPDELVQGDLPRSGGAALRRENRLERLTRVD
RAESEQVRSVGDAAQPANAVRRRGSGGSSKVWAVGDRLMHSSFGEGHVTHLFGSGEKISI
AVKFEGMGPKILDPRLAPIQPL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggggttcctggctggactgaacgacgctcaacgccgtgccgttgatcaccac
gttggcccgctgctcgtggttgcgggcgccggcagtggtaaaacgcgtgctctcacccat
cgcattgctcacctcattgggcagcatggtgtggatccggctgaattgttggcagtcacc
ttcaccaataaggctgcccgagagatgaaagagcggctggagttactcctggcccaaaag
ttagctcagagccagtttggtcagccctggagcacattgcctgcggttgagcagcgtcag
ctgcgctcgaggatttatcgagacgtcatcaaggacctttggattggcacgtttcatgca
ttgtttgctcgtcttcttcgttttgatatcgataaattccgtgatccagaagggctgact
tggacgcgtcaattctcgatctacgatgagggtgatacgcagagtctggttaaggagatt
gtgacccaggagcttggattagaccctaagcgatttgaaccaaaaaaggttcgttgggcg
atcagtaatgcaaaaaatcaaggttggatccctgaacagcttgaagctgacgcgggtgga
cagcgcggcaaacttatggctgaaacctatcgccgttatcgccgggctctcgctgccaac
aatgcccttgacttcgacgacctattgctgctgcctgttcagttgctgcgtcagaatgat
gaggtgcgccattactggcaccggcgcttcaagcatgtgttggtggatgagtaccaagat
accaaccgcactcaatatgagctaatcaagctccttgttgccgatggtcgcgatccagcg
gattttggcgagtggcagggacggtctgtgtttgttgttggcgatgctgatcaaagtatt
tatagcttccgagcggctgatttcaccatcctgatgggttttcaggaggactttggtgac
ggtgcgccggatgatgctacgcgcaccatggtgaaacttgaagaaaactatcgttccact
gccacgattcttgaagctgccaatgcgctcatctcgaataataccgagaggattgataag
gttttgcggcccacccgtggcgatggtgagctgatcaccctcacccgttgtgacgacgag
attgccgaggctgaggctgttgtgcatcgcatgcgcatgttggaggctgctaatccagat
ctcggttggcgcgacatggctgtgctgtatcgcaccaatgcccaaagccgtgcgatggag
gagtcgctggtgcgctggggcatcccttatgtggtggtgggcggactgcgcttttatgac
cggcgtgaaatcaaggacatccttggctatttgaagttgctggtgaatccggccgatacg
gtgagcctgttgcgagttctcaatacgcccaagcgtgggattggcaagaccacgattgaa
cgtctgagtgatgcttccaatcagcttgggatccccctctgggatgtggtgagtgatcca
gaggctgtgcgctccttgggggggcgttcggcgaagggcctactgcaattcagtgagctg
attcgttcgttgcaagcccgtgcagaaacggcgccgccttcggagttggtgcaagtggtg
atggagcagagcggttatgtggctgagttgattgcagctggtacggacgaggctgaagat
cgacgccgcaatctcaatgaattggtgaatgctgctcttcagtatcaggaggaaaacgag
gaggggtcgcttgatgatttcctcgcctctgccgcccttgccagtgatgccgatagcaaa
gacacggagcaggaccgcgtcacgttgatgaccttgcatgccagtaaggggcttgagttc
ccggtggtgtttctggtgggattggagcagggcctgtttcccagctaccgctcgttggat
gatccagcggcgatggaagaagagcggcgcctttgttatgtcggtattacccgcgccaag
gaacgcttgtttttgtctcacgccagtgaacggcggctgtggggcgggatgcgtgagccg
gctgtgccatctgttttcctctcggaacttccagatgaactcgtgcagggggatcttccc
cgcagtggcggggcagctctgaggcgtgagaaccgcttggagcgtctcacccgcgtggat
cgggctgagagtgagcaggttcgatctgtcggagatgcggcgcagccagccaatgccgtt
cggcgtcgtggatccggtggctccagcaaggtttgggccgtgggtgatcgattgatgcat
agctccttcggtgaggggcatgtgacccacctgttcggtagtggtgaaaagatctcaatc
gcggtgaaatttgagggcatgggacccaaaatcctggatccgcgcttggcaccgattcag
cccctatga
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