Synechococcus sp. CB0101: CB0101_10485
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Entry
CB0101_10485 CDS
T06409
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sync03016
]
CB0101_10485
Enzymes [BR:
sync01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CB0101_10485
Transfer RNA biogenesis [BR:
sync03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CB0101_10485
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QCH15301
UniProt:
A0A4P7ZU64
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All DBs
Position
complement(1966431..1967135)
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AA seq
234 aa
AA seq
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MAQAPASTLTSPQSSGPVAPAAGSNPARFAVLDGDLTPEWHELLGRSSALAVDTEAMGLV
HGRDRLCLVQISDDQDNVCCIRILRGQSEAPLLKQLMEHSGIVKVFHFARFDVAALGEGL
GIAVNPLFCTKVASRLARTYTNRHGLKELVSELCGVELDKGAQSSDWGRVEELSETQLAY
AANDVRYLLPARERLTQMLEREERLDLAQRSFQCIPVIAELDRGRFGAIFEHRS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagctcctgcctccaccttgaccagcccccaatccagcggtcccgttgcaccg
gccgccggctctaacccggcccgcttcgccgtgctcgatggcgatctcacgccggaatgg
catgagctgctcggccgctccagcgccctggcggtggacaccgaagccatgggcctcgtg
catggccgtgatcgcctctgcctggtgcagatcagcgacgatcaggacaacgtgtgctgc
atccgcatcctgcggggccagagcgaagccccactgctcaagcagctgatggagcactcg
ggcatcgtgaaggtgttccacttcgcccgcttcgatgtggcagccctgggcgagggcctc
ggcatcgccgtgaatccactgttttgcaccaaggtggccagccgcctggcgcgcacttat
accaaccgccatggcctcaaagagctggtgagcgagctctgcggggtggagctcgacaag
ggcgcccagagcagcgactggggccgcgtggaagaactcagcgagacacaactggcctat
gccgccaacgacgtgcgctacttgctgcccgcccgggaacggctgacccaaatgctcgag
cgcgaagagcgcctggatctggcgcagcgcagcttccagtgcatcccggtgattgccgag
ctcgatcgcggccgcttcggggcgattttcgagcaccgcagctga
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