Synechococcus sp. CB0101: CB0101_12180
Help
Entry
CB0101_12180 CDS
T06409
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CB0101_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sync03021
]
CB0101_12180
Transcription machinery [BR:
sync03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CB0101_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
AP_endonuc_2
Thg1
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
QCH15576
LinkDB
All DBs
Position
2254778..2255710
Genome browser
AA seq
310 aa
AA seq
DB search
MPARHAPVASTVKTWLNTSSAHRPLCERTVMELSRRIQRWQQHPDGPSHAPKPVRRSALR
AREQLVRHNLGLVAHTWGRHRCSLPAHDDTTADALQEAALNLVRAAEKFDPAKGYRFSTY
ATFWVRRGFTEFEQRAKRAIRFPAEKAAVVLKALRLSQQHQATTGDEPALEWLAAQLKFD
GKAMSAEQLAEFIRQWDATRTGSLDGAEEEGDEKGGCSRLDLASLQQAAEQQLTQEPDPQ
HASLPQLMSCLDEQEHRLIRNRYLRRPPLSPCQLRRSMGGMQREQLEQLEATALDKLRQA
ATGHNLKIQL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgtcatgcccccgttgcctccaccgtgaagacctggctgaacacaagcagt
gcccatcgcccgctgtgcgagcgcacggtgatggagctgtcgcgccggattcagcgctgg
cagcaacaccccgatggcccaagccatgcaccgaaacctgtgcgccgcagtgccctgcgg
gcccgagaacaactggtgcgccacaacctcggcctggtggctcacacctgggggcgccat
cgctgcagccttcccgcccatgacgacaccactgccgatgcgctgcaggaagcggcgctg
aatctggtgcgggccgccgagaaatttgatccggccaagggttatcggttctccacctac
gccaccttctgggtgcggcgggggttcaccgaattcgaacaacgcgccaagcgcgcaatc
cgcttcccggcagagaaagcagcggtggtgctcaaggctctgcgattgagccaacaacat
caggccaccacgggcgatgagccagcgttggagtggctggccgcccagctcaagttcgat
ggcaaagcgatgagcgcggagcagctggcggagttcatccgccagtgggatgccacccgc
accggatccctggatggtgcagaggaagagggtgacgaaaaaggtggatgtagccggctt
gatctggcctccctgcagcaagcggccgaacagcagctgacacaagagcccgacccacaa
cacgcgtccctgccgcagttgatgagctgcctggatgaacaggagcaccgcctgattcgc
aaccgctacctgcgccggccgcctctgagcccctgtcagctgcgccgctccatgggcggg
atgcagcgcgagcagctggaacagttggaagcaaccgccctggacaagttgcgccaggcc
gccaccggtcacaacctcaagattcagctctga
DBGET
integrated database retrieval system
