Synechococcus sp. CB0101: CB0101_14445
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Entry
CB0101_14445 CDS
T06409
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sync
Synechococcus sp. CB0101
Pathway
sync03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CB0101_14445 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sync03400
]
CB0101_14445 (xseA)
Enzymes [BR:
sync01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CB0101_14445 (xseA)
DNA repair and recombination proteins [BR:
sync03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CB0101_14445 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCH16381
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Position
2665955..2667112
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AA seq
385 aa
AA seq
DB search
MNGDPGLPRYSVAELNQAIASLLERGFAPRFLLEATVSRPQLKKGHLWLTLVDEQASISG
VVWASQLSKLSVQPSEGDGVLVVGKLNFWASRASLCVQILDLRPSLSAVLRQFERVRCLL
EPEGLLDPARKQPLPAMPAAIALLTSVPSSALADMLRTAQERWPATRIHVVPIPVQGPVE
EQIRSRLAEVLARAGELGIEALVLARGGGSREDLAVFDSEALARDLAACPLPVVTGLGHE
DDTTIADLVADYRAATPTAAVVALLPDRQHLGLALQQQRILLRQAVNNRLQQERLRLAAS
QERLVALHPRQLLANARQQLQQRIELLHALSPRRLLERGFTLLHGADGQLVRSVRQVSPG
DALQVVLADGRINTVVQTTEPGADG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgatccggggctgccgcgttacagcgttgctgaactgaaccaggcgattgca
tcgctcttggaacggggctttgcgccacgttttctgctggaagcaacggtgtcgcggccg
cagctcaaaaaagggcacctctggctcaccctggtggatgagcaggcctcgatctcaggc
gtggtctgggcgtcacaactcagcaagctcagcgttcagcccagcgaaggcgatggcgtg
ctggtggtgggcaagctcaatttctgggcgagccgcgcgagtctctgcgtccagatcctc
gatctgcggccgagcctcagtgccgtgctgcgccaattcgagcgggtccgctgcctgctg
gaacccgaaggcctgctcgatcccgcccgcaagcagccgctaccggccatgcctgcggcg
attgccttgctcaccagcgtgcccagttctgctctggccgacatgctgcgcacagcccaa
gagcgctggcccgccacgcgcatccatgtggtgcccatccccgtgcaggggcctgtggaa
gagcagatccgcagccgactggcggaggtactggcccgtgccggcgagctcgggatcgaa
gcgctcgtgctggcccgaggcggcggaagccgtgaagacctggcggtgttcgatagcgaa
gccttggcccgcgacctcgctgcctgcccactgccagtggtcacggggctgggccacgaa
gacgacaccaccattgcggatctggtggccgattaccgagccgcgaccccaaccgcagcc
gtggtggccctgctgccagatcgccaacacctggggctagcgctgcagcagcaacggatc
ctgctccgccaagccgtgaacaaccgcctgcaacaggagcgccttcggctggcggcgagc
caggagcgcttggtggcactgcatccacgccaactgctggcgaacgcccgtcaacagctg
cagcaacgcatcgagctactgcacgcgctctctccgcgtcgtctgttggagcgggggttc
actctgctgcatggtgccgatgggcaactggtgcgttcggtgcggcaagtcagtcccggc
gatgccctccaggtggtgctggcagacggcaggatcaacactgttgtgcagaccacggaa
ccaggcgctgatggctga
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