Synechococcus sp. KORDI-52: KR52_01620
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Entry
KR52_01620 CDS
T03346
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd03420
Nucleotide excision repair
synd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR52_01620
03430 Mismatch repair
KR52_01620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synd03400
]
KR52_01620
Enzymes [BR:
synd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR52_01620
DNA repair and recombination proteins [BR:
synd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR52_01620
MMR (mismatch excision repair)
Other MMR factors
KR52_01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
NPHP3_N
AAA_11
AAA_22
ResIII
AAA_16
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AII47861
UniProt:
A0A076HEM9
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All DBs
Position
complement(291583..293973)
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AA seq
796 aa
AA seq
DB search
MSFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFT
NKAAREMKERLEVLLAQRLAQSQYGQPWSTLPPVDQRQLRSRIYREVTKELWIGTFHALF
ARMLRYDIDKFKDAEGLTWTKQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKTRWAIS
NAKNQGWLPDQLEANAEGQRGKLTADVYRRYRKALAANNALDFDDLLLLPVQLLQQNEQV
RSYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTDGKDPQDVEDWSGRSVFVVGDADQSIYS
FRAADFTILMGFQDDFGDQAPDDSTRTMVKLEENYRSTATILEAANALIANNSERIDKVL
RPTRGEGELITLTRCDDEIAEAEAVVHRLRTMEAANPELSWGDMAVLYRTNAQSRSIEES
LVRWGIPYIVVGGLRFYDRREIKDLLAYLRLLVNPADTVSLLRVINVPKRGIGKTTIQRL
TDAANQLGIPLWDVVSDPEAVRSLGGRSAKGLLQFCDLVNDLKARSADVAPSELIQQVME
KSGYVSELIADGTDEAEERRRNLQELVNAALQYQEENDEGDLEGFLATAALSSDADNKDT
AADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAKER
LFLSHACERRLWGGMREAAVPSVFLSELPEALIQGDLPQTGGAALRRERRLDRLTRVDRD
KPSSAPANAVRRRQAGPAPGRSWQVGDQVIHASFGVGEITHTFGSGEKVSIAVKFAGMGP
KILDPRLAPIEPVTTA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctggccggcctcaacgatgcccagcggcgggctgtcgaccatcacgagggt
cccctgctggtggtggcgggtgctggaagtggcaagacgcgcgccctcacccatcggatt
gctcacctgatcggtgagcacggtgccgatccggctcagattctggcggtgaccttcacc
aacaaagccgcccgggagatgaaggagcggcttgaggttcttctggctcagcgtctggcc
cagagccagtacggccagccctggagcaccctgcctccggtggatcagcgtcagctgcgc
tcacgcatctaccgggaggtgaccaaggagctgtggattggcaccttccatgccctgttc
gcgcggatgctccgctacgacatcgacaagttcaaggacgcggaaggactcacctggacc
aagcagttttcgatctacgacgaggccgacgcccagagcctggtgaaggagatcgtgacc
caggaactgcagctggatcccaagcggttcgagcccaagaagacccgctgggccatcagc
aacgccaagaaccagggctggctgccagaccagctcgaggcgaacgcggaaggccagcgg
ggcaagctcaccgcggatgtttatcggcgttatcgcaaggccctggcggccaacaacgcc
cttgatttcgacgatctgctgttgctgccggttcagttgctccagcagaacgagcaggtg
cgcagctattggcaccgccgctttcgccacgtgctggtggatgaataccaggacaccaac
cgcactcagtacgacctgatcaagctgttggtgaccgatggcaaggatcctcaggatgtg
gaggactggtcgggccgttccgtgtttgtggtcggcgatgccgaccagagcatctacagc
tttcgcgcggctgacttcacgatcctgatgggtttccaggacgacttcggtgatcaggcg
ccggatgacagcacccggacgatggtgaagctggaggagaactaccgctccaccgccacg
attctcgaagcggcgaatgccctgatcgccaacaacagcgaacggatcgacaaggttctg
cgtcccacccgtggggaaggggagctgatcaccctcacccgctgtgacgatgagatcgcc
gaggcggaagccgtggtgcaccgcctgcgcacgatggaagcggccaatcctgagttgagc
tggggtgacatggccgtgctctaccgcaccaatgcccagtcccgctccattgaggaatcg
ctggtgcgctggggcatcccgtacatcgttgtgggggggctgcgcttctacgaccggcgc
gaaatcaaggatctgctggcctatctgcggttgctggtgaatccggccgacaccgtcagc
ctgctgcgggtgatcaacgttccgaagcgcggcatcggcaagaccacgattcagcggctc
accgatgcggccaaccagctggggattccgctctgggatgtggtgagtgatcccgaagcg
gtgcgctccctcggcggccgttccgccaagggtcttctgcagttctgtgaccttgtcaac
gatctgaaggcccgcagcgctgatgtggccccctcggaactgatccagcaggtgatggag
aagagcggctacgtgagcgagttgattgccgatggcaccgatgaggctgaggagcgccgc
cgcaacctgcaggaactggtgaatgccgcactgcagtaccaggaggaaaacgacgagggc
gacttggagggattcctcgccacggcagccttgtccagcgatgccgacaacaaggacacg
gccgcggaccgcgtcaccttgatgacgctgcacagcagcaaggggctggagttccccgtg
gtgtgcctggtgggccttgagcagggtctgttccccagctaccgctccctggatgacccg
gcctcactggaggaggagcggcggctttgctacgtgggcatcacccgagccaaggaacgg
ctgttcctgtcccatgcctgtgagcggcgtctctggggcggcatgcgtgaagcggcggtg
ccctcggtcttcctgtcggagttgccggaagcgctgattcagggcgaccttccccagacc
ggtggggcggcgctgcggcgggaacggcgcctcgatcggctcacccgtgtggaccgcgac
aagccgtcatcggcccccgccaacgccgtgcgtcgccgtcaggcgggccccgccccgggc
cgcagctggcaggtcggcgatcaggtcatccacgccagctttggtgtgggtgagatcacc
cacaccttcggcagtggcgagaaagtgtcgatcgcggtgaagttcgcagggatggggccc
aagattctggatccgcgcctggcgccgatcgaacccgtgaccaccgcttaa
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