Synechococcus sp. KORDI-52: KR52_01860
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Entry
KR52_01860 CDS
T03346
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR52_01860 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synd03400
]
KR52_01860 (ruvB)
Enzymes [BR:
synd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR52_01860 (ruvB)
DNA repair and recombination proteins [BR:
synd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR52_01860 (ruvB)
RecFOR pathway proteins
KR52_01860 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_14
AAA_16
AAA_22
nSTAND3
TsaE
TIP49
AAA_25
AAA_33
DUF815
AAA_18
Rad17
RNA_helicase
AAA_17
NACHT
AAA_28
NB-ARC
bpMoxR
IstB_IS21
AAA_24
Sigma54_activ_2
DUF305
Motif
Other DBs
NCBI-ProteinID:
AII47906
UniProt:
A0A076HER7
LinkDB
All DBs
Position
complement(345277..346323)
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AA seq
348 aa
AA seq
DB search
MAIVSSSSGRKPPRRPEALVDPQSAPEEVVSRPDDKLRPQRLDDYIGQSELKQVLGIAVQ
AALGRGDALDHVLLYGPPGLGKTTMAMVLAEEMGVQCKVTSAPALERPRDIVGLLVNLQP
RDLLFIDEIHRLSRVAEELLYPAMEDRRLDLTVGKGSTARTRSLDLPPFTLVGATTRAGS
LSSPLRDRFGLIQRLEFYGQNDLEAIVSRTAGLIGVTLTQQARSSIAASCRGTPRIANRL
LRRVRDVASVRRGSGGTIDQALVGEALSLHRVDHRGLDASDRRFLQLLIEHHGGGPVGLE
TLAAALGDDPVTLETVVEPFLLQQGLLMRTPRGRMVTDAARSHLAEAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtctcctccagctccggtcgcaagccaccacgccgccctgaagcgctggtg
gatccccagtcggcccctgaggaggtggtgagtcggccggacgacaagctgcggcctcag
cgtctggacgattacatcggtcaaagcgagctgaagcaggtgctgggcattgcggtgcaa
gcggctcttggccgcggcgatgcccttgatcacgtgctgctgtatggcccgccgggcctc
ggaaaaaccaccatggccatggtgctggccgaggagatgggggtccagtgcaaggtcacc
agtgcaccggccctggaacgcccgcgcgacatcgtcggcttgttggtcaaccttcagccc
cgcgacctgctgttcattgatgagattcaccgcctgagtcgggtggcggaggagctgctc
tatccggcgatggaagaccgtcgcctcgatctcactgtgggcaagggcagcacggcgcgg
acccgctcccttgacttgccgccgttcaccttggtgggggccaccacccgcgccggatcg
ctgagttcaccactgcgggatcgcttcggtctgattcagaggttggagttttacggccag
aacgatctggaagcgattgtgtcgcgcaccgcagggttgattggggtgaccctcacgcag
caggcccgcagcagcattgcggcctcctgccgcgggacgccacggattgccaaccggtta
ttgcgccgggtacgggatgtggccagcgtgcgtcgaggtagcggtggaaccattgatcag
gccctggtgggagaggccctgagcctgcatcgggtcgaccatcgaggcctcgatgccagc
gatcggcgctttctgcagctgctgattgagcaccacggtggaggaccggtgggcctggag
actctggcggcggccctcggcgatgaccccgtcaccctggagaccgtggtggaaccattt
ctgttgcagcagggattgctgatgcgcactccccgcggtcggatggtcacggatgcggcc
cgcagccatctggcggaggcggcatga
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