Synechococcus sp. KORDI-52: KR52_02220
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Entry
KR52_02220 CDS
T03346
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd00550
Peptidoglycan biosynthesis
synd01100
Metabolic pathways
synd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KR52_02220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KR52_02220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
synd01011
]
KR52_02220
Enzymes [BR:
synd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KR52_02220
Peptidoglycan biosynthesis and degradation proteins [BR:
synd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KR52_02220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AII47976
UniProt:
A0A076HEW9
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All DBs
Position
complement(421358..423145)
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AA seq
595 aa
AA seq
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MTRLAQQRQTGLRQQPLVLLLLVLMFCGAMVSRLVWMQLLEGSRFRELADENRIRLVPRS
PIRGRLLDRKGRVLATSKLTYSLYLEPRLVSDDDWPDLRDRLARLLNLEPDLLDQRRQKG
LDRDGYRTTLALDLKPEQVLRFREQALVLRGAQVDVDILRSYPNGTLAAHALGYTQPITE
NEYDVLAEKGYKIRDRIGRTGVEAAYESHLRGKWGGQMLEVNAMGEVQRNLGDRPSEAGK
DLVLTLDLDLQRVAEQALADKPGGAVVALEAATGAVLALASRPSFDPNFFSKLITTQREY
DALFSNPKKPLLSRAMNPYDPGSTWKPVTAIAGMESGKFPPDTKLHTKACITYGGHCFPD
HNGAGFGHIGYADALRFSSNTFFYQVGVGVGSKALKQAADQLGFQQKTGIEIGWEESVGL
VGDEDWAARGRGWTDPGTSPWIPEDMASASIGQSVVQITPLQLARAYAVFANGGWLVTPH
LASGDIDWLSPEHRTKVAIKPSTLQTIREGLRKVVEAGTGAGLNGPGIPPAAGKTGTAED
STGGPDHAWFGCYAPYPDGKIVVVAFAQNTPGGGSVHALPMAKKVLAEWERTRQR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtttggcacagcagcggcagaccggtctgcgacagcaaccccttgtgctgctg
ctgttggtgctgatgttctgcggcgccatggtcagccgcctggtctggatgcagctgctg
gaggggtcgcgcttccgtgaactggcggatgaaaaccgcatccgtcttgtaccccgctcg
ccgatccgcggtcgcttgcttgatcgcaaagggcgggtgctggccaccagcaagctcacc
tattcgctgtacctcgagccgcgtctggtcagcgatgacgactggcctgatctgcgtgat
cgcctggccaggctgctgaatctggagcctgatctgctggatcagcgccgtcagaagggt
ttggatcgggatggttatcgcaccacattggccctggatctcaagccggaacaggtgctg
cgcttccgtgaacaggccctggtgttgcggggtgcccaggtggacgtcgacattctgcgg
tcctatcccaacggaaccctggcggctcacgccctcggctacacccagccgatcacggaa
aacgaatacgacgttctggcggaaaagggctacaagatccgcgatcggatcggtcgcacc
ggggttgaagccgcctacgagagccatctgcgtggcaagtggggcggccagatgctggag
gtgaatgccatgggtgaggtacagcgcaacctgggtgatcgcccctcagaagcaggaaag
gatctggtgctcaccctcgatctggatctgcagcgggtggcggagcaagcgctggcggac
aagcctggcggcgccgtggtggcgttggaggcggccacaggtgccgtgttggccttggcc
agccgccccagttttgatccgaactttttctccaagctgatcaccacccagagggagtac
gacgcccttttctccaatccgaagaaaccgttgctgtctcgggccatgaatccctatgac
cccggcagcacctggaagccggtgacagcgatagccggcatggagtcgggcaaattcccg
cccgataccaagctgcataccaaggcctgcatcacctacggcggccactgtttccctgat
cacaacggggctggcttcggtcacatcggctatgccgatgctctgcgcttctccagcaac
acgttcttctaccaagtgggggttggagtcggctccaaggcgctgaaacaggcggctgat
cagctgggctttcagcagaagaccggtattgagatcggctgggaagagagtgtcgggttg
gtgggggatgaagactgggcagcacgcggccgcggctggactgatcccggcacgagcccc
tggatccctgaggacatggccagtgcctccatcggtcagtccgtggtgcagatcacccct
cttcagttagcccgcgcctatgcggtgttcgccaatggtggttggttggtgacgccgcac
cttgcctccggtgacatcgattggctgagcccagagcaccgaaccaaggtggcgatcaag
ccttcaaccttgcagacgatccgggaggggttgcgcaaagtggtggaggccggaaccggt
gcaggcctcaatggtcctggcattccaccggcggccggcaaaaccggaacggcggaggac
agcacgggaggacctgaccatgcctggttcggctgctatgccccctatcccgacggcaag
attgtggtggtggcctttgcccagaacaccccaggcggtggatccgttcacgctctgccg
atggccaaaaaggtgctggcggagtgggaaaggacccggcagcgctag
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