Synechococcus sp. KORDI-52: KR52_06055
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Entry
KR52_06055 CDS
T03346
Name
(GenBank) DEAD/DEAH box helicase
Organism
synd
Synechococcus sp. KORDI-52
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Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_cyano_M
ResIII
DEXQc_Suv3
Helicase_C
nSTAND3
AAA_22
ATPase_2
AAA_30
nSTAND_NTPase5
IstB_IS21
DUF6158
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AII48704
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Position
1138718..1141492
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AA seq
924 aa
AA seq
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MNQSTPATPRSEPDVDRSAPLNPSEIFAFPLDDFQLEAMDALNQGHSVVVSAPTGSGKTL
IGEYAIHRALAHGQKVFYTTPLKALSNQKLRDFRDQFGAENVGLMTGDLSVNREASIVVM
TTEIFRNMLYAEADEHDDPLADVEAVVLDECHYMNDSQRGTVWEESIIHCPPTVQLVALS
ATVANAGQLTDWIEKVHGPTTLVMSDHRPVPLQFSFCSAKGLHPLLNAAGTGLHPNCKVW
RAPKGHKRKGRSQRPPQPEPPPISFVVAQMAERQMLPAIYFIFSRRACDKAVRDLGVQCL
VTQEEQARIKERFTAYSNDNPEAVRDGIHADALLRGIAAHHAGVLPAWKELIEELFQQGL
VKVVFATETLAAGINMPARSTVIAALSKRTERGHRPLMGSEFLQMAGRAGRRGLDSQGYV
VTVQSRFEGVREAGQLATSPADPLVSQFTPSYGMVLNLLQRHVLAKARELVERSFGRYLA
GLDLVEDEENLSQLRLQLSQLEGVAGDIPWEDFEDYEKMRGRLREERRLLRILQQQAEET
LANELTMALQFASTGTLVSLKSPQLRGRVAPAVIVEKVKGPGQFPLLLCLTDENVWILLP
CQAVVSIHAELSCLQVDGLQAPELTRSGELRHGDQASGGLALAVAHMARRHDMTTPQYDL
AGEVLTQARLVRDLEQEQEQHPAHRWGDRKQLKKHRRRMADLELEIAERQQLLHQRANRH
WETFLALMEILQHFGCLDELDPTEIGRTVAALRGDNELWLGLALMSGHLDDLSPPDLAAV
FEAISTEVNRPDLWSGFPPPAAAEEALQDLSGLRRELLRAQERAGVVVPAWWEPELMGLV
DAWARGTSWSDLIANTSLDEGDVVRIMRRTVDLLAQVPYCEAISDQLRSHARQALKAINR
FPVAEAEDLVPSSAALNPATERAA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcgacaccggccacgccccgatccgagcccgatgtcgatcgcagcgcccca
ctgaatccctcagaaatctttgccttcccgctggatgatttccagctggaggccatggat
gccctcaaccagggacattcggtggtggtcagtgcccccacaggatccggcaaaaccctt
atcggtgaatacgccattcatcgcgccctggcccacggccagaaggtcttctacaccaca
cctctgaaggctctctccaatcagaaactgcgagatttccgcgaccagttcggtgcggag
aacgtgggtttgatgaccggtgacctcagcgtgaatcgcgaggcctccatcgtggtgatg
accacggagatcttccgcaacatgctctacgccgaggcggatgagcacgacgatcccctg
gctgatgtggaggcggtggtgctcgatgagtgccactacatgaacgactcccagcgcggc
acggtctgggaggagtcgatcattcactgcccacccacggtgcagctggtggcgctctcc
gccaccgtggccaatgccgggcagctcaccgactggatcgagaaggtccatggtccgact
acgttggtgatgagtgatcaccggccggtaccactgcagttcagcttctgcagcgccaaa
gggttgcacccactgctgaacgctgccggcacggggttgcatcccaactgcaaggtctgg
cgcgcgcccaaggggcacaagcgcaaagggcgttcccagaggccgccgcagccggagcca
ccgccgatcagcttcgtggtggcccagatggccgagcggcagatgcttccggccatctat
ttcattttcagccgccgcgcttgtgacaaggcggtgcgggatctgggggtgcagtgcctg
gtgacccaggaggagcaggcccggatcaaagagcgcttcacggcgtacagcaacgacaac
cccgaagccgttcgggatggaatccatgctgatgcgctgctgcgcggtatcgctgcccac
catgccggtgttctgcctgcctggaaggagttgattgaggagctcttccagcaggggctg
gtgaaggtggtcttcgccacggagaccctggcggcgggcatcaacatgccggcccgcagc
acggtgattgcggccctctccaagcgcaccgaacgtgggcatcgcccgctgatgggcagt
gagttcctccagatggccggtcgggccgggcggcgtggcctcgattcccagggctacgtc
gtgacggtgcaaagccggtttgaaggggtgcgtgaagcaggtcagctggcgacgagtccc
gccgaccccctcgtgagccagttcacccccagctacggcatggttctcaacctgctgcag
cgccatgttctggccaaggccagggagctggtggaacgcagctttggccgctatctggcg
ggacttgacctcgtggaggatgaggagaacctgtcccaactgcggctgcaactcagccag
ctcgagggcgtcgctggcgacatcccctgggaggactttgaggactacgagaaaatgcgt
gggcggctccgcgaagagcggcgcttgctccgcattcttcagcagcaagccgaggagacg
ctggccaacgagctgacgatggccctgcagttcgccagcaccggcaccctggtcagcctc
aaatcgccgcagctgcgggggcgtgttgccccggcggtgatcgttgagaaggtgaagggg
cccggccagttcccgctgctgctctgcctgaccgatgaaaacgtctggattttgctgccg
tgtcaggccgtggtgagcatccatgcggagctcagttgtctgcaggtggatgggctgcag
gcaccggagttgacccggtccggcgagttgcgccatggcgatcaggccagtggtggtctg
gctttagccgtggcccacatggcccggcgccacgacatgaccaccccgcaatacgacctg
gctggagaggtgttgacccaggcccgtctggtgcgggatctcgagcaggagcaggagcag
catcccgcccaccgctggggagatcgaaagcagctcaagaagcaccgccggcgcatggcc
gatctggaactggagatcgcggaacggcagcagctgctgcatcagcgggctaaccgtcat
tgggagaccttcctggccttgatggagatcctgcagcacttcggatgtctcgatgagctg
gatcccaccgagatcggccgcaccgttgctgccttgcggggagataacgaactctggctg
gggctggcgctgatgagtgggcatcttgatgacctctcccccccagacctggcggccgtg
ttcgaggcgatcagcactgaggtcaaccgccccgatctctggagcggttttccgccgcct
gcggctgctgaggaagccctgcaggatctctcgggcctgcgtcgcgagctgctgcgggcc
caggaacgcgccggtgtggtggtgccagcctggtgggaacccgagctcatgggtctggtg
gacgcctgggcgcgggggacctcctggagtgatctgatcgccaacacgtccctggacgag
ggcgatgtggtgcggatcatgcgccgcaccgtggatcttctggcccaggtgccctactgc
gaagccattagcgatcagttgcgcagccatgcccgccaggctttgaaggcgatcaaccgg
ttccccgtggccgaggccgaggatctggtgccgtcctccgcggcgctcaatccggcaacg
gagcgggcggcctga
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