KEGG   Synechococcus sp. KORDI-52: KR52_06445
Entry
KR52_06445        CDS       T03346                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
synd  Synechococcus sp. KORDI-52
Pathway
synd03030  DNA replication
synd03410  Base excision repair
synd03420  Nucleotide excision repair
synd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:synd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KR52_06445
   03410 Base excision repair
    KR52_06445
   03420 Nucleotide excision repair
    KR52_06445
   03440 Homologous recombination
    KR52_06445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:synd03032]
    KR52_06445
   03400 DNA repair and recombination proteins [BR:synd03400]
    KR52_06445
Enzymes [BR:synd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KR52_06445
DNA replication proteins [BR:synd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KR52_06445
DNA repair and recombination proteins [BR:synd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KR52_06445
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KR52_06445
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AII48780
LinkDB
Position
complement(1216649..1219609)
AA seq 986 aa
MPEATTKPLLLLVDGHSLAFRSFYAFSKGGEGGLATRDGRPTSVTYGFLKALLDNSKSLK
PEGVAIAFDTAEPTFRHKADANYKAHRDVAPEVFFQDLEQLQQILETHLQLPLCMAPGFE
ADDVLGTLANRAADSGWGVRILSGDRDLFQLVDDSRDIAVLYMGGGPYAKNSGPTLIREE
GVLGKLGVMPDKVVDLKALTGDSSDNIPGVRGVGPKTAINLLKDNSDLDAVYTTLEQVEA
EGPKASRGAIKGALKGKLRADRDNAYLSRKLAEILVDVPLPKEPSLPLSSVDADGLSRCL
EDLELNSLLRQVKGFVAAFSQGGYGANAEAAEAKTSRRSASTEPAAAEAATAPATNDDVG
LPALKPQLIQTETALDALVQRLMACTDSSLPVAFDTETTDLNPFRAELVGIGICWGEDLN
ALAYIPLGHKGSDDSSPEQLPLETVLTALAPWLASSNHPKTLQNAKYDRLILLRHGVALE
GVVIDTLLADYLRDAAAKHGLELMAEREFGFQPTAFTDLVGKKQTFADVPLEPASLYCGM
DVHVTRRLALLLRHQLEAMGPRLLPLLNQVEQPLEPVLALMESTGIRIDVPYLQGLSEEM
GTTLQRLEADAQKAAGVEFNLASPKQLGELLFDTLGLDRKKSRRTKTGFSTDATVLEKLG
NDHPVVPLVLEHRVLSKLKSTYIDALPQLVETETGRVHTDFNQAVTATGRLSSSNPNLQN
IPVRTEYSRRIRKAFLPQEGWTLLSADYSQIELRILTHLSGEEVLQEAYRSGDDVHALTA
RLLLDKDEVSSDERRLGKTINFGVIYGMGAQRFARETGVSQSEAKEFLAKYKQRYPKVFA
FLELQERLALSRGYVETILGRRRPFHFDRNGLGRLLGKDPLEIDLDVARRGGMEAQQLRA
AANAPIQGSSADIIKVAMVQLQDALQRQGLAAQLLLQVHDELVLEVAPDALEATRELVVQ
TMEQAVALSVPLVVETGVGANWMEAK
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgcccgaggccaccaccaagcccctcctgctgcttgttgatggccattccctggcattc
cgcagcttctacgccttcagcaaaggaggtgagggtggccttgccaccagagacggcagg
ccgacaagcgtgacctatggcttcctcaaagccctgctggacaacagcaaatctctgaag
cccgaaggggtcgccatcgccttcgacacggccgagcccacctttcgccacaaggctgac
gccaattacaaggcccaccgggatgtggcccctgaggtgttcttccaggaccttgagcag
ctgcagcagatcctcgagacgcacctgcagctccccctctgcatggccccaggcttcgaa
gccgacgatgtgctgggaaccctggcgaaccgagcggccgactcggggtggggcgttcgg
atcctctcgggagaccgcgacctgttccagctggtggatgacagccgcgacattgcagtg
ctttacatgggtggcgggccctatgccaaaaacagtggcccaacgctgatccgcgaagag
ggggtgctcggaaagctcggcgtgatgcccgacaaggtggtggacctcaaggccctcacc
ggtgacagctccgacaacatccccggcgtgcgtggtgttggccccaaaacagccatcaac
ctgctgaaagacaacagcgacctcgacgcggtgtacaccaccctcgagcaggtggaggcc
gaagggccgaaagccagtcggggcgccatcaaaggtgcactgaaagggaagttgcgcgcc
gaccgcgacaacgcctacctctcgcgcaagctggccgagattcttgtggatgttcccctg
cccaaggaacccagcctgccgctgtcgtcggtggatgccgatggcctgagccgctgcctg
gaggacctcgagctcaacagcctgctgcgccaggtgaagggcttcgtggcggccttttcc
caagggggctatggggccaatgcggaggccgctgaagccaagacctctcgccgctcagcc
agcacagagcccgcagctgcagaggccgcaaccgcaccggcaaccaacgacgacgtgggg
ctgccggccctgaaaccgcagctgatccagaccgaaacagccctggacgccctggtgcag
aggctgatggcctgcaccgacagcagccttcctgtcgccttcgacaccgagaccaccgac
ctcaacccgttccgtgccgaacttgtgggcatcggcatctgctggggagaggacctgaac
gcgctcgcttacatccccctgggccacaaaggcagcgacgacagcagcccggagcagctg
ccgttggaaaccgtgctcaccgccctcgccccctggctggccagcagcaaccaccccaag
accctgcagaacgccaagtacgaccgcttgatcctgctgcgtcacggcgttgccctggag
ggcgtcgtgatcgacacattgctggccgattacctgcgggatgccgcagcgaaacacggc
ctggagctgatggccgaacgggaattcggcttccagcccaccgccttcactgatctggtg
ggcaagaagcaaaccttcgccgatgtgccgctggagcccgccagcctctactgcggcatg
gacgtgcacgtcacccgccgcctcgccctgctgctgcgccatcagctggaggccatgggt
ccacggctgctgccgctgctgaaccaggtggagcaaccgctggaaccggtgctggccctc
atggaatccaccggaatccgcattgatgtgccctatctccagggcctttccgaggagatg
ggcaccaccctgcagcggctggaagccgacgcccagaaagccgccggggtggagttcaac
ctggcctcacccaaacagttgggagaacttctgttcgacacccttgggctggatcgcaag
aaatcccggcgcaccaaaaccggcttcagcactgatgccaccgtgctggagaaactcggc
aacgaccacccggtggtgcccctggtgctggagcaccgggtgctcagcaagctcaagagc
acctacatcgacgccttgccgcagctggtggagacggaaaccgggcgggtgcacaccgat
ttcaaccaggcggtgacggcaacgggacggctgagcagcagcaaccccaacctgcagaac
attccggtgcgcaccgagtacagccggcgcatccgcaaggccttcctgccgcaggagggc
tggaccctgctcagcgccgactactcccagatcgagctgcgcatcctcacccacctctcg
ggagaagaggtgctgcaagaggcctaccgcagcggcgatgacgtgcacgcgctgaccgcc
aggctgctgctggacaaggacgaggtcagttcggacgaacgccggctcggcaaaaccatc
aacttcggagtgatctatggcatgggagcccagcgcttcgcccgggaaaccggcgtgagc
cagagcgaagccaaggagttcctggccaagtacaagcagcgctacccaaaggtgttcgcc
ttcctcgagctgcaggagcggctcgccctcagccgcggctacgtggaaacgatcctcggc
cgccggcggccgttccacttcgatcgcaacggcctggggcggctgctgggcaaggacccc
ctggagatcgacctggatgtggcccgccgcggtggcatggaggcgcagcaactgcgggcc
gccgccaacgctccgattcagggctcaagtgccgacatcatcaaagtggcgatggtgcag
ctgcaagacgctttgcagcgtcaggggctggcggcccagctgctgctgcaggtgcacgac
gaactggtgctcgaggtggcaccggatgccctggaggccacgcgagagctggtggtgcag
accatggaacaggccgttgcgctgagtgttcccctggtggtggagaccggcgtgggcgcg
aactggatggaggcgaaataa

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