Synechococcus sp. KORDI-52: KR52_06480
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Entry
KR52_06480 CDS
T03346
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KR52_06480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synd02000
]
KR52_06480
Transporters [BR:
synd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KR52_06480
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AII48787
UniProt:
A0A076HJB9
LinkDB
All DBs
Position
complement(1227181..1228818)
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AA seq
545 aa
AA seq
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MGRPVVDKGPLNHIDRPTRWTFGGVLVALVLAFVQMGCQAPPPTSRITVASAGRISSLDP
AQASTLSAMQLISALGDPLYRLKRDGSLEPRLAAAAPVLSDDGRIVTIPLRTDVLFHDGT
PFNAAAMAFSLRRFLNIGTLSYVVGDRIASVEEADTYTLRLRLNRPSTSLQGLLTSINLT
PISPTAYSSYEDRFLHDRFVGTGPYKLTDFSEHQQRLKPFPQYWGEAPRNNGLDLITLSN
STALYGALLSGEVDLLLSASIDEDQRYALHERAIAGDLHESVGPAMEIGYITLLSNQKPF
QDQRLRQALAVSLNRKQISERVSYGLRRPLRALVPPSLPGGALASWPQHNTGQARELLKA
AGYCNGSPLRFPLTFRSNVPADKLLALTWQAQVQQDLHDCLVLDLDGVESTTIYRQLGEG
AFKAVMLDWRGSYPDPEAYLTPLLSCTTETGDTCVEGEAAISGSFWSAPGLQNALLESDT
LMGGARLKALDRVEQLSADGAAYIPIWLDSPRAWAQLNLRPPKFDGSGQLMLADLERRFK
TRTTN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggccgacctgttgtcgacaaaggcccgttgaatcacatcgatcgccccacacgatgg
acgttcggtggcgttctcgtggcccttgtcctggccttcgtccagatgggctgtcaggca
ccgccacccacaagccgcatcacggtggcttcagcggggagaatcagctccctggatcca
gcccaggccagcaccctcagcgccatgcagctgatcagcgccctgggcgatccgctctat
cgcctcaagcgtgatggatcgctggaaccccgtctggcggcagcggctccggttctgagt
gacgacggtcggatcgtcacgattccgctgcgcaccgatgttctgtttcacgatggaacg
ccctttaacgccgcggccatggccttcagcctgcggcgctttctcaacatcggaaccctg
agctacgtggtgggcgaccgcatcgcctcggtggaagaggccgatacgtacaccctgcgc
ctgcgcctgaatcgaccatccacatccctgcagggcctgctgacgtcgatcaacctcacc
cccatctcaccgacggcctacagcagctacgaggaccgttttctgcacgaccgctttgtc
ggaacagggccttacaagctgaccgacttcagcgaacatcagcagcggctaaaacccttt
ccgcagtactggggtgaagcacctcggaacaacggcctggatctgatcacgctgagcaac
tccacggcgctgtacggggcgttgctcagtggcgaagtggatctgctgctctccgcttcc
atcgacgaagaccagcgctacgccctgcatgaacgggccatcgccggagacctgcacgag
tccgtgggtccagcgatggagatcggctacatcaccctgctgagcaaccagaagccattc
caggatcaacgtttgagacaggccctggccgtcagtctcaaccgcaagcagatcagcgaa
cgggtgagctacgggctgcgccgtccgctgcgggccctggtgccccccagccttcccggc
ggagccctggcctcatggccgcaacacaacaccgggcaggcccgcgagctgctcaaggcg
gctggctattgcaacggcagcccactgcgctttcccctcaccttccgctccaatgtgccc
gctgacaaactgctggccctcacctggcaggcccaggtgcaacaagacctccacgactgc
ctggtgttggatctcgatggcgttgagtccacgaccatctaccgccagctgggggagggt
gccttcaaggccgtgatgctggattggcgcggcagttaccccgatcccgaggcctatctg
acgccgctgttgagttgcacaacggagacaggcgacacctgtgttgagggagaagctgcg
atcagtggcagcttctggagcgcccccggattgcagaacgccctcttggaatcagacacc
ttgatgggaggcgcacggctaaaggccctggatcgcgtcgaacagctctccgccgacggt
gcggcctacatccccatctggctcgattccccccgggcctgggcccaactgaacctcagg
cctccaaaatttgacggcagtggtcagttgatgctcgctgacctggagcgccgcttcaag
acgaggacgaccaactga
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