Synechococcus sp. KORDI-52: KR52_07950
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Entry
KR52_07950 CDS
T03346
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR52_07950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synd03400
]
KR52_07950
Enzymes [BR:
synd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR52_07950
DNA repair and recombination proteins [BR:
synd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR52_07950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AII49072
UniProt:
A0A076HK53
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All DBs
Position
1478146..1481391
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AA seq
1081 aa
AA seq
DB search
MLTVYRSNRAEFLARLLSRQLIEQQPGPLETVEVMVNTWPTSRWLGEQLATANGISSLVR
FPFPGSRLRQLVRQVLHLPAQEDDPWRAGQLVWAVLELLPELLEQPVAQPLQVWLNQREG
TASGLTRDRWQLARTIADAMDDYALYRPDQLEQWKRPRPDDDWQPLLWRLLAQRLPRAPF
GLQVREAVDRLRRGDVDPALLPERLRLFGISALAPVQVDLIQALSGLLEVEIYLLTPCPD
LWQRCGSRRASLGDDWLVPPDGGWLAEAPRLEAVLGRMGAEFQQLLEGSGEAQLGERREG
DLFAGSLQIADAEERQPTLLDQLQQQLVDADSVPALERSTDDQSLLFQAAPGPWREVQLV
RDRILQWLEADPDLAPRDVLVMTPQIERYAPLLSSVFNDTAAIGVDLPWRLTDRSQQSSP
GLSMAMFTLLELAATRLTATGLERLLGNPALQGQQGLTPEEAVLMTQTLQRSGFRWGLDA
RERGGEEVHSLRWCLDRWLLGLVLPVEPGLAPAGAAPFQQELDPDRLVRWWTLLDRLARM
FDRLRQPRPCHDWVQLLQSLLQELFAEGGAWADEAQSWAAALEEWRLRAHDCPLDLDAAV
ALEVLQEALSVDSGRFGHRSGALTISALEPMRAIPHKVVVLMGLDSADFPRPSRRPGFHL
LEQQRRLGDPRSSDQDRYVLLEALMSARRHLLISWCGRLERTGEPQPPAAPVEQWLSVLQ
EQLQRAGASTEGLLVTPAANPLSRENFRPEAPLSCDRRQLEARRCLDAAPASVPNPQGLA
WASLWQPKINDDEADGRDGDDLALDAEVLLAWMQQPQKAWLQARGLRPGEGIEAVEDLEA
LELDGLQRYLLLNQDLEEHFILGSAPDWTASLAGQGVLPAGAGAALEQEELQQRWQALQR
QLASLGDCRREVPVLAGLPMPLLYAGDTQVVVQPGMLTAAAVMRGWLQHLLLCAEGSAPA
AGSAVVARSTRVAGAEVHVRWSVLPTVEAEDQLQQLARLARQGLERCWPVPPKSGWQMVA
KERRKPGEGQQDFRKAWQDEGSTPVMQLCFGTEIAAEQLMDQAGFQQACQLLYGPLVANL
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacggtttaccgaagcaacagggctgaatttctggctcgcttgctttcccgtcag
ttgatcgagcagcagcccggccctcttgagacggtggaggtgatggtcaacacctggccg
accagtcgatggttgggggaacagctggccacggccaatggcatcagttccctggtgcgg
ttccccttcccgggcagtcgtctgcggcagctggtgcgccaggtgttgcatcttcccgcg
caggaggacgatccctggcgggcgggccagctggtgtgggctgtgctcgagctgttgccg
gagctattggagcagcccgtcgcccagccgttgcaggtctggctcaaccagcgtgaagga
accgcctcggggttgacgcgggaccgttggcagttggcacgcaccatcgccgatgccatg
gacgattacgccctctaccgccccgatcaactggagcagtggaaacggccgcggcccgat
gacgactggcagcccctgctctggcgactgctggcccaacggctgccccgggctcccttt
ggcctgcaggtgcgtgaggcagtcgatcgtctccggcgaggagacgttgatccagccctg
ctgccggagcggctgcggctgtttggcatcagtgccctggcaccggtgcaggtggatctg
attcaggccttgtccggtctgctggaggtggagatctacctgctcaccccctgtccggat
ctgtggcagcgctgcggcagtcggcgtgcctcgctcggggatgactggctggttccgccc
gatgggggctggttggccgaggcgccgcgcctggaggccgttcttggacggatgggtgcc
gaatttcagcagttgctggagggttccggtgaagcgcagctgggggagcgacgcgagggg
gatctgtttgcaggttccctgcagatcgccgatgcggaagagcgccaacccaccctgctc
gatcagcttcagcaacagctggtggatgccgacagcgttcccgcactggagcgttccaca
gacgatcagtcgctgctgtttcaagcggcaccggggccttggcgggaggtgcaactggtg
cgtgatcgcatcctgcagtggctggaggccgatcccgatctcgcgccccgcgatgtgctg
gtgatgacgccgcagattgagcgctatgcaccgctgctcagctccgtgttcaacgacacg
gcggccatcggtgtcgatttgccctggcgcctcaccgaccgcagtcagcagagcagtccg
gggttgtcgatggcaatgttcacgctgctggagctggcggccacacgcctcaccgccacg
gggctggaacgtctgctgggcaatccggccctgcagggccagcagggactcacgccggag
gaggcggtgctgatgacccagacgctgcaacgcagtggttttcgctgggggttggatgcc
cgcgagcgtggcggagaggaggtgcacagcctgcgttggtgtctcgaccgttggctgctg
gggctggtgctgccggtggagccgggcttggctccagcaggtgcggcaccgttccagcag
gagctagatcccgatcgcctggtgcgctggtggacgctgctggaccgtttggcgcggatg
ttcgatcgcctgcgacagccccggccgtgccatgactgggtgcagctcctgcagtccctg
ttgcaggagctgttcgctgagggtggggcctgggccgatgaggcgcagagctgggcggcg
gcccttgaggagtggcgattgcgggcccatgactgccccctggacctcgatgcagccgtg
gccttggaggtgctgcaggaggccttgtcggtggacagcggtcgcttcggtcatcgcagt
ggcgccctcaccatcagtgccctggagccgatgcgggcgattccgcacaaggtggtggtc
ttgatgggcctcgacagcgccgacttccctcgcccgagccgccgtcctggcttccatctg
ctcgagcagcaacggcgcctgggggatccccgcagcagtgaccaggaccgctacgtgctg
ctggaggccttgatgtcggcacgccgtcatctgctcatcagctggtgcgggcggctggag
cgcaccggtgagccccagccgcctgctgcgccggtggaacagtggctttcagtgctgcag
gagcagttgcaacgggccggtgcctccacggaggggttgttggtcactccggcggccaac
cccctctcccgtgaaaacttccggccggaggcgccgctcagttgtgatcggcgtcagctg
gaggcccggcgctgcctggatgctgctccggcttcagtcccgaatccccaggggttggcc
tgggcatcgctctggcagccgaagatcaacgatgacgaggccgatggacgggacggagac
gatctggccctggacgctgaagtgttgctggcctggatgcagcagccccagaaggcctgg
ttgcaggcgcgggggttgcgacctggggaaggcattgaggcggtggaggatctcgaggcg
ctcgagttggatggcctgcagcgctatctgctgctcaaccaagatcttgaagagcacttc
attctcggatcggctccggattggacggcgtcgctggcgggccagggtgtgctgccggcg
ggggctggtgcggcccttgagcaggaggagctgcagcagcggtggcaggccctgcaacgg
cagcttgcatcgcttggtgactgccgccgggaggtgccggtgctcgccggcctgccgatg
cccctgctctacgccggcgacacgcaggtggtggtccagcccgggatgctcacggccgcg
gcggtgatgcgcggctggttgcagcacctgttgctgtgcgctgagggatcggctcctgct
gccggttcagcggtggtggcgcgcagcacccgggttgccggcgccgaggtgcacgtgcgc
tggtcggttttgccgacggttgaggccgaggaccagctgcagcagctggcgcggctggca
cgacaggggctggagcggtgctggccggtcccccccaagagcggctggcagatggtggcc
aaagagcggcgcaaaccgggggaggggcagcaggacttccgcaaggcctggcaggacgaa
gggtccaccccggtgatgcagctctgcttcggcacggagatcgctgcggagcaattgatg
gatcaggccggatttcagcaggcgtgtcagctgctgtacggcccccttgtggcgaacctg
cgttaa
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