Synechococcus sp. KORDI-52: KR52_08075
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Entry
KR52_08075 CDS
T03346
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd00300
Lysine biosynthesis
synd00470
D-Amino acid metabolism
synd01100
Metabolic pathways
synd01110
Biosynthesis of secondary metabolites
synd01120
Microbial metabolism in diverse environments
synd01230
Biosynthesis of amino acids
Module
synd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KR52_08075
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KR52_08075
Enzymes [BR:
synd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KR52_08075
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AII49097
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All DBs
Position
complement(1503428..1504807)
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AA seq
459 aa
AA seq
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MTPTITSQRPFEVNRDTASPNRNLTPITTELDGSDRLVVGGCHLSDLAKRYGTPLYVLDE
ATVRATCRAYRQALDKHYSGPSLPIYASKANSSLVMSSLVASEGLGLDAVSAGELLTALR
GGMPGERMVLHGNNKSDDELLLAYANNVTIVVDNQHDLDRLAQLVPTEKPPARLMLRFTP
GIECHTHEYIRTGHLDSKFGFDPEQVEPVLRSLVGQPWARLTGLHAHIGSQIFELEPHRD
LAAVMADKMKLARDLGHPVTDLNIGGGLGIRYVESDDPPSIEQWIQVVSEAVTEACRERG
LELPRLMCEPGRSLVATAGVTLYTVGSRKTIPNVRTYVAIDGGMSDNPRPITYQSLYTCC
LADRPLANTDESVNLVGKHCESGDVLLKDLPLPTTESGDVVAVFATGAYNASMSSNYNRI
PRPAAVLVHEGSAELVQKREQPDDLLRYDVLPERFNAVR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccaaccatcaccagtcaacggccctttgaggtcaaccgggacacggcgagcccc
aaccgcaacctgacaccgatcaccaccgaactcgacggttccgaccgcctggtggtaggg
gggtgccatctcagcgatctggcgaagcgttacggcacaccgttgtacgtcttggacgag
gcgaccgtacgggcgacctgcagggcctaccgccaggcccttgacaagcactactcaggt
ccgtcgctgccgatctatgcctccaaggccaacagctccctggtgatgagcagcctggtg
gcctccgagggcttgggcctggatgctgtttccgccggtgaactgctgacggcgctgcgg
ggagggatgcccggggagcgaatggtgctgcacggcaacaacaaatccgacgatgaactg
ctgctcgcctacgccaacaacgtcacgatcgtggtggataaccaacacgatctcgatcgc
ctggcccagctggtgcccacagagaagccaccggcacgcctgatgctgcgctttaccccc
ggcatcgagtgccatacgcacgaatacatccgcacgggacacctggacagcaagttcggc
tttgatcccgaacaggtggagccggtgctgcgcagcctggtcggacaaccctgggctcga
ctcaccggcctgcacgcccacatcggatcccagatctttgaactcgaaccccaccgggat
ctggccgcagtcatggccgataaaatgaagctggcccgcgatctcggccatcccgtgacc
gacctcaacatcgggggcggtcttggcattcgctacgtggaatccgatgatccgccgagc
attgagcagtggatccaggtggtgtccgaagccgtcactgaggcctgccgtgagcgtggg
ctcgaattgccacggttgatgtgtgaaccggggcgctccctggtggcgaccgctggggtg
accctctacacggttggttcgcgcaaaacgatccccaacgtgcgtacttacgtggccatc
gacggtggcatgagcgacaacccccgccccatcacctaccaatcgctctacacctgctgc
ctggccgatcgacccctggccaacacagacgaaagcgtgaacctggtgggcaaacactgt
gagtcgggcgatgtactgctcaaggaccttcccctgcccaccactgagagcggagacgtt
gtcgctgtgtttgccaccggtgcctacaacgcctcgatgagttcgaactacaaccggatc
ccaaggcccgctgcagttctggtgcacgaagggtcagcggagctggtgcagaaacgggag
cagccggatgacctgctgcgctacgacgttttgccggaacgattcaacgcggtacgttga
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