Synechococcus sp. KORDI-52: KR52_09805
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Entry
KR52_09805 CDS
T03346
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
synd
Synechococcus sp. KORDI-52
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synd03016
]
KR52_09805
Enzymes [BR:
synd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KR52_09805
Transfer RNA biogenesis [BR:
synd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KR52_09805
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AII49434
UniProt:
A0A076HPL2
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Position
1766691..1768721
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AA seq
676 aa
AA seq
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MNNSVQPGDTVAVVLKGSPLLGRLLSIKGSKAVLSFGGQRRDQGLPLRDLIAIDPEHRFV
NSDLPAPEQVQDSAPSARAVVEAWQLLETDQPGGLTRLSLCELGELVLTPFNLAGLAALW
AWLHSNQQLFRWRRDRLIQPLPREERASLRRQRRAERQEQQHERRQLALLRAERALNDDE
RLELDPVWDERFSHWIQLLKDNPAAVGSDLDLQQWSTALSMGSDAADLRQWLIVRGLLDP
NEPICLRGSVWSRRFASDLVEEANRLVALSNEELPGDEQRIDLTHLTTYSLDDAGTREID
DALSLERRDGMDWIWIHIADPNRLIDIDSPLDQEARRRATSLYLAEGVMPMLPLELAAGP
LSLRAGHRCAALSVAVRLDDDGAVAEQRIARSWIRPRYGLTYGDGDELIELAPPGDEALS
DLSGLLMLRMRWRRSKGAVMFDRPEGRFRRSDGALTLQVIDPSPSRLMVSEAMLLMGAVV
ASFGQKHSLPLPFRSQPAAELPSSDELDRIPEGPARDAAIKRCLSRGVQGTRALPHFSLG
LEAYVQATSPIRRYADLIAHRQIIAQLSALAPMDEERLGEVIDDLDDPLRQSIQISREDQ
RHWQQVWFAEHQSTVWTAVFLRWLRPQDRLALVHVSDLAMDLVGCVSADDPAPGDVLELK
VGRADPVRGELQLQLA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaattccgtccaacccggagataccgtcgcggttgttctcaagggttctcctctt
ctcggccgtcttctgtccatcaagggcagcaaggcggttctttcttttggtggtcaacgt
cgtgaccagggccttcccctgcgcgacctgattgccattgatcccgagcatcgcttcgtt
aacagtgaccttcctgcacctgagcaggtgcaggacagcgctccatcagcacgggccgtc
gtggaggcttggcagctgctggaaacggatcaaccggggggattgactcgactgagcctc
tgcgagctgggcgagttggtgttgaccccgttcaacctcgctgggttggcagcgctgtgg
gcctggctgcatagcaaccaacagttgttccgctggcgtcgtgaccgtttgatccagcca
ctcccccgcgaggagagggccagcctgcggcgccaacgccgagctgagcggcaggagcaa
cagcatgaacgacgacagctcgccttactgcgggctgagcgagccctcaacgacgatgaa
cgcctggagctggaccctgtttgggacgagcgcttcagccactggattcagttgctgaaa
gacaatccagctgcggtgggttccgaccttgatctccagcagtggtcgacagcgttgtcg
atgggatcggatgccgccgatctaaggcagtggttgatcgtgcgtgggttgctcgatccc
aatgagcccatttgcttgaggggcagcgtctggtctcgtcgttttgcctctgatctggtg
gaggaagcgaatcgtcttgttgctctttcgaatgaagagctgcctggggatgagcagcgc
atcgacctcactcacctgaccacctacagcctggacgatgcgggcacccgagaaattgat
gacgcgctctcgctggagcgtcgtgatggcatggattggatctggatccacatcgctgat
ccaaaccgtctgatcgacattgactccccccttgatcaggaagctagacgtcgggctacc
agtttgtatctggcggaaggtgtgatgcccatgctccctctggagctggcggctggcccc
ctgagcctgcgggcagggcatcgctgtgcagccctgagtgtggccgttcgcctcgatgac
gatggtgctgtggcggaacaacggattgctcgcagctggatccgacctcgctatggcctc
acgtacggcgatggcgacgagctgatcgaactggctcccccaggggatgaggccttgtcg
gatctctcgggactcttgatgttgcgcatgcgctggcgccgctccaaaggagccgtgatg
tttgaccggcctgaaggacgcttccgccgcagcgatggggccttgacactgcaggtgatt
gacccgtcaccctcccgcctgatggtgagtgaagcgatgttgctgatgggggctgttgtg
gccagctttgggcaaaagcacagcctgccgttgcccttccgcagtcagcctgcggcggag
cttccctccagcgatgaactcgatcgaatccccgagggaccagcccgtgatgcggcgatc
aagcgctgcctgagccgtggcgtgcaaggcacgcgggccctgccccatttcagtcttggc
cttgaggcttatgtgcaggcaacgtcaccgattcgacgctatgccgatctcatcgcccac
cggcagatcattgcccagctgtctgctcttgcaccgatggatgaagagcgtcttggggag
gttattgacgatctcgatgatccattgcgccaatccattcaaatcagccgagaggatcag
cgtcactggcagcaggtgtggttcgccgagcatcagagcaccgtctggacggccgtgttc
ctgcgctggttgcgcccgcaagatcgcttggccttggttcatgtgagcgacctggccatg
gatctggtgggttgtgtttctgcagacgaccctgcccctggcgacgttcttgaactcaag
gtgggtcgtgctgacccggtacgcggtgagcttcagcttcagttggcttga
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