Synechococcus sp. KORDI-52: KR52_10845
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Entry
KR52_10845 CDS
T03346
Name
(GenBank) membrane protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KR52_10845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synd02000
]
KR52_10845
Transporters [BR:
synd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KR52_10845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
IstB_IS21
AAA_18
NB-ARC
TsaE
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AII49636
LinkDB
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Position
1943630..1945393
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AA seq
587 aa
AA seq
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MAVLRLDLIGRYLRPHRRTVLLGAITLVVVNILRVTIPMEVRSVVDELQEGFSYSAILRQ
AGWVVLLASTMGVIRLASRQLIFGVGRQVEVDLRQRLFEHMLRQEPEWIQSKGSGEVISR
ATSDVENIRRLLGFAILSLTNTLLAYALTLPAMLAIDPWLTLAAVGLYPVMLSTVRLFGG
RMMRQKRAQQEELSALSNLIQEDLSGIGAIKIYGQEASEQEAFAARNRSYRDSAIRLGRT
QNTLFPLLQGISSMSVLLLLAIGSGQLESGRLSVGGLVALILYVEQLVVPTALLGFTLNT
FQTGQVSLERVEELLQREPQIKDADPVPVRSRSTQQRKGCFEARGLTVHYDSAENNTLNG
LSFCIEPGELVAVVGAVGCGKTTLARAFGRMVPLSPGQLFLDGVDVTQMALEDLRRDVAI
VPQEGFLFTSSLADNLRYGDPEATYQQVELAADQARLADDIKGFPDGFETIVGERGITLS
GGQRQRTALGRALLMSSPVLVLDDALASVDNNTAAAILDSIRAQDARTIVMISHQLSAAA
ACDRILVMESGRIVQQGHHSRLIQQPGVYKRLWERQQASQQLDTMAS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttcgtctcgacctgatcggccgctacctgcgcccccatcgacgcaccgtc
ctgttgggagccatcactttggtggtggtcaacattctgcgggtaacgatcccgatggaa
gtgcgcagcgtcgtcgatgagctgcaggagggattcagctattcagcgatcctgcgtcag
gcggggtgggttgtgctccttgccagcaccatgggagtgattcgcctggcctcgcggcag
ctgatcttcggagtgggtcggcaggtggaagttgatctgcgccaacgcctgttcgagcac
atgctccgtcaggaacccgagtggattcaaagcaagggcagcggtgaagtcatcagccgt
gccaccagcgatgtggagaacatccggcgtctgctgggattcgcgattctcagtctgacc
aacacgcttctggcctacgcactcacgcttccagccatgttggcgatcgatccatggctg
accctggccgctgtggggctctatcccgtgatgctgagcactgtgcggctgtttggtggg
cgcatgatgcgtcagaagcgcgcccagcaggaagaactttcggctctcagcaatctgatt
caggaagacctctcggggatcggagccatcaagatctacggccaagaggcatcggaacag
gaggcctttgcggcacgcaaccgcagctaccgagacagtgccattcgtctggggagaact
cagaacaccctgttccctctgcttcagggcatttcatcgatgtcggtgctgttgctgctg
gccatcggcagcggtcagctcgaatccggccgcctcagtgttggtggtctcgttgcactg
atcctctacgtggagcaacttgtggtcccaacggcactcttgggtttcacactcaacacc
tttcagaccggacaggtcagcctcgagcgggtggaggaattactgcagcgcgagcctcag
atcaaagatgcagatcctgtgcctgtccgctctcgctcaacccagcaacggaagggatgc
tttgaagcccgtggtctgacggtgcactacgacagtgctgagaacaacacgctcaacggc
ctgagcttctgcatcgaaccgggagaactcgtggccgttgttggtgcagtgggatgcggc
aaaaccaccctggctcgtgccttcggacgcatggtccccctttcgccaggccagctgttt
ttggatggtgtggatgtaactcagatggctcttgaggatttgcgccgtgatgtggcaatc
gttccccaggagggctttttgttcaccagctccctggctgacaatctccgctatggcgac
cctgaggcaacgtatcaacaggtcgaactggctgccgatcaggctcgcctggctgatgac
atcaagggatttcccgatggtttcgaaaccatcgttggcgaacggggcatcacgttgagt
ggtgggcaaaggcagcgcacggcacttggacgggccttgctgatgtcgtcgcctgtgctg
gttcttgatgacgccttggcgagcgtcgacaacaacacggccgcagcaattctcgattca
attcgagctcaggatgctcgcacgatcgtgatgatcagccatcagctgtctgccgccgct
gcctgcgatcgaatccttgtcatggagagcgggcgcatcgttcaacaggggcaccacagc
cgactgattcagcagcccggggtctacaagcgactatgggagcgtcagcaggcatcacaa
caactggacaccatggcttcctga
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