Synechococcus sp. KORDI-52: KR52_12400
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Entry
KR52_12400 CDS
T03346
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd02010
ABC transporters
synd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KR52_12400
03070 Bacterial secretion system
KR52_12400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synd02000
]
KR52_12400
02044 Secretion system [BR:
synd02044
]
KR52_12400
Transporters [BR:
synd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KR52_12400
Secretion system [BR:
synd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KR52_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
ABC_ATPase
AAA_21
AAA_22
AAA_29
nSTAND1
AAA_16
AAA_30
RsgA_GTPase
DUF87
ABC_membrane_3
Peptidase_C39
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AII49931
UniProt:
A0A076HKC6
LinkDB
All DBs
Position
complement(2196476..2199388)
Genome browser
AA seq
970 aa
AA seq
DB search
MLEHPAFIGLSKASVDNLESGCNLLRFALGGQLSDANHIAARVLVLLQGQARLVGRLNGR
LTTIGKFGPGSVIGAASLLCGAPCEEVIAAEEVIACAIPDELWRGLYRKETSFRQWCDQQ
LWPQELHQLLEVLEQNNPESDSSALEKLEALQQSAERCSSDPESVETALSAGKLIYVTSA
WGELTVGQPLYSAANLPKCEPFALRLVSLPASGWSNTAEAEAAAEISSGWLDSVAGIQDA
QALPPVSSFSPERNVVDSLRLIQADGPIQETLACFQMLAQLMKLPFRRDSIEKVLQDNIR
RGLTPNLQLCGQLATSLGLHVMAARVPAAAGTRLQVPSMLPWQEGFALVVASNERGLRLA
SPQQGMVSLEPNQLEDAFPEGIELLLMERSNATPDQKFGPGWFWPALKRYRGVLIQVLAA
SFVVQLFTLANPLLIQVIIDKVITQRSLDTLQVLGIALVVVTILEGVLGSLKTFLFAETT
NRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFLTGQALTTILDAAFSV
IYIVVMLLYSWLLTLIALSVLPIQIGLTILGAPLFRRQFRAAAEENAKTQSHLVEVLTGI
QTVKAQNVEMVSRWRWQEFYSQYIARTFEKTITGTALSQTSQVLQKISQLMVLWIGATMV
LKGDLTLGQLIAFRIISGYVTQPLLRLSSIWQNIQELRVSFERLADVIDTPEESNEVDKS
KVMLPPLQGDVRFENVTFRFQAGQSEVLKDVNLEIKAGTFVGIVGQSGSGKSTLMKLLPR
LYEPGEGRILVDSYDIGKVELYSLRRQIGIVPQDPLLFSGTVSDNIALTNPDASSEEIMR
AARLANAHDFIMELPSGYSTPVGERGAALSGGQRQRVAIARTLLSNPKLLVMDEATSALD
YETERKVFDNLFENINDRTVFFITHRLSTIRQADLIVMLHQGAVVEVGTHDELMKHRGRY
YALYRQQESF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagcatccggcgttcattggcctctccaaggcatcggttgacaatttggagagc
ggctgcaatctgcttcgttttgcgctcggggggcagctgtccgacgccaatcacattgcg
gcccgagtcttggttctgctccaaggccaggccaggcttgtcggccgtctcaacggccgc
ctcaccacaattggaaagtttggacccggaagtgtgatcggggccgcaagtcttctgtgc
ggtgctccatgcgaggaggtcatcgccgctgaagaggtgattgcttgtgccattccggat
gaactctggcgggggctttatcgcaaagagacttcatttcggcagtggtgtgaccagcag
ctttggccgcaggagctgcaccagctcctggaagttctggagcaaaataatcctgaaagc
gacagctccgcccttgaaaaactggaggctttgcagcagtccgccgagcgttgttcatca
gatccggaatctgtggagactgctctatctgccgggaagctgatctatgtcaccagcgca
tggggtgaattgactgtcggtcagccgctctattctgctgcaaaccttcccaaatgtgag
ccgttcgcgctccggttggtgtctctgcccgcctccggctggtccaatacagccgaagct
gaagctgcggcggagatcagttctggctggcttgactctgttgctgggattcaagacgct
caggctctgcctcccgtgagcagctttagccctgagcgcaatgttgttgacagccttcgc
ttgatccaggccgatggcccgatccaggaaaccctggcttgcttccagatgctggcccag
ctgatgaagctgcccttccggcgcgattcgatcgagaaggttcttcaggacaatatccgc
aggggattgacgcccaatcttcaactttgcggccagttggccaccagtcttggcttgcat
gtgatggctgcccgggtgccggccgctgctggtacacgacttcaggttccctccatgctc
ccttggcaggagggctttgccttggtggtggccagcaatgagcgtgggctgcggctggcg
tctccgcagcagggcatggtcagcctggagccgaatcaattggaagatgccttcccggag
ggaattgaacttctcctgatggagcgttccaacgcaactcccgaccagaagttcggccct
ggttggttctggccggctttgaagcgatatcgcggcgtgttgatccaggtgctggcggcc
agttttgtggttcagctgttcaccctcgccaacccgttgctgatccaggtgatcatcgac
aaggtgatcactcaacgcagcctggacacgttgcaggtgctgggcatcgcccttgtggtg
gtcacgattcttgagggggttctgggcagtctgaagaccttcctgtttgcggaaaccacc
aaccggattgatcagcgtcttggcgcagaggtgatcgaccacctgttgcgtctccccctt
ggttatttcgaccgtcgtccagtgggtgaactgggaacccgggtggctgaactggagaag
attcgtaattttctgaccggtcaggccctcaccaccatcctggatgccgccttttctgtg
atttacatcgtggtgatgctgctgtacagctggcttcttactttaattgccctgtccgtt
cttcccattcagatcggcttgacgattctgggtgctcctctcttccgccgtcagttccga
gctgctgcggaagaaaatgccaagactcagagccatttggtggaggttctcaccggaatt
cagacggtgaaggcccagaacgtggagatggtcagccgctggcgctggcaagagttctac
tcccagtacattgcccgcacttttgagaaaacgattactggaacggccctgagccagacc
agccaagtgttgcagaagatctctcagctgatggtgctctggatcggtgccacgatggtg
ctcaagggtgatttgacgctgggtcagttgatcgcatttcggatcatttccggctacgtc
acccagcctcttctgcgtttgtcatcgatctggcagaacatccaggagttgcgcgtcagc
tttgaacggcttgctgatgtgattgataccccagaagaatctaatgaggtcgataaatcc
aaggtgatgctccctccgctgcagggagacgtgcgctttgagaatgtcaccttccgcttt
caagctggccagtctgaggtcctcaaggatgtcaatcttgagatcaaggccggaacgttc
gttggcatcgtgggccagagcggtagcggcaagagcaccctgatgaaactgctgccaagg
ctttatgaaccaggagaaggtcggatcctggttgacagctacgacattggaaaggttgag
ctttattccctacgacgtcagatcggcatcgttcctcaggatccccttttattcagcgga
accgtgagcgacaacatagctctcaccaatcccgatgcctccagtgaagagattatgaga
gcagcacgtctcgctaatgcccatgacttcatcatggaacttcccagcggctacagcacg
cctgttggtgaacgaggcgcggcactaagtggcggacagcgtcagcgggtggccattgcc
cgcacccttctcagtaatcccaagttgctggtgatggatgaagccaccagtgcccttgat
tacgaaactgaacggaaagtcttcgacaaccttttcgaaaacatcaacgaccgcaccgtt
ttcttcatcacccaccgtctgtcaaccatccgtcaggctgatttgatcgtgatgctgcac
cagggcgcggttgttgaagttggcacgcacgatgagttgatgaaacatcgtggccgctac
tacgccctttaccgccagcaagagagtttctga
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