Synechococcus sp. KORDI-52: KR52_12465
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Entry
KR52_12465 CDS
T03346
Name
(GenBank) transposon TnsE
KO
K00554
tRNA (guanine37-N1)-methyltransferase [EC:
2.1.1.228
]
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd00900
Terpenoid backbone biosynthesis
synd01100
Metabolic pathways
synd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KR52_12465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synd03016
]
KR52_12465
Enzymes [BR:
synd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.228 tRNA (guanine37-N1)-methyltransferase
KR52_12465
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KR52_12465
Transfer RNA biogenesis [BR:
synd03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KR52_12465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
tRNA_m1G_MT
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
AII49944
UniProt:
A0A076HR46
LinkDB
All DBs
Position
complement(2206488..2207696)
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AA seq
402 aa
AA seq
DB search
MTKPFRLDVVSLAPQAFAPLLELGVIGRAFNAGIAALHLHNPRDFATDRHRKVDDEPYGG
GAGMVLKPEPVFAAMEAIPRSPRSRVLLMSPQGRPLQQQDLQRWSIDHDQLVFLCGHYEG
FDERIRGLADEEVSVGDFVLTGGELPAMTVINGVVRLLPGTVGTADSLVEESHSALLLEH
PHYTRPADFRGVTVPDVLRSGDHGAIARWRQEQREQRTRERRPDLFARWQAATMTNPSDP
GMELRIGNGYDIHRLVPGRAIILGGVTLDHPDGLGLDGHSDADVLVHAVMDALLGALALG
DIGKYFPPTDPQWKGADSLKLLDQVVKLVKERGWSVLNIDAVVIAERPKLKPYIAEMSSR
IASAIGIAPDSVGVKATTNEGLGPEGREEGISCQAVALLQRS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaccgtttcgccttgatgtggtgagcctggcgccgcaggcgtttgctcctctg
ctggagcttggagtgatcggtcgtgccttcaacgcgggcattgctgcgttgcacctgcat
aaccccagggacttcgccacggatcgccatcgcaaggtggatgacgagccctatgggggt
ggcgccggcatggtgctcaagcccgagccggtgttcgccgcgatggaggctatcccccgc
agtccccgaagccgggtgctgttgatgtcaccgcaggggcgtcccctgcagcagcaggat
ctgcagcgttggtccatcgatcacgatcaactggtcttcctctgcggccactacgagggg
ttcgacgagcgcattcgtggcctggctgatgaggaggtgtcggtgggcgatttcgtcctc
accggcggggagctgcctgccatgacggtgatcaacggtgtggttcgtctgctgcctggc
acggtggggacggctgattccctggtggaggaaagccacagtgcactcctcctggaacac
ccgcattacacccgccccgccgacttccgtggcgtgaccgttccggatgtgctgcgcagt
ggcgatcacggtgccatcgcccggtggcgtcaggagcagcgggagcagcgcacccgcgag
cgccggcctgatctgtttgcccgctggcaggcagcgacaatgactaacccttcagaccca
ggcatggagctgcgcatcggcaacggatacgacatccaccggctggtgcccggtcgggcc
atcatcctcggcggtgtgaccctggaccatcccgacggtttgggcctggatggccacagc
gacgccgatgtgctggtgcatgccgtgatggatgccctgctcggggccctggccctgggt
gatatcggcaagtactttccccccaccgatcctcaatggaaaggggccgacagcttgaag
ctgctggatcaggtggtgaagctggtgaaggagcgcggctggtcggtgctgaacattgat
gcggtggtgattgccgagcgccccaagctcaagccgtacatagcggagatgagcagccgg
atcgcgtcagcgatcggcattgctccagactccgtgggtgtgaaggccaccaccaatgaa
ggtttgggtccggagggacgggaagagggcatcagttgccaggctgtagcccttttgcag
cggagctga
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