Synechococcus sp. KORDI-52: KR52_14150
Help
Entry
KR52_14150 CDS
T03346
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
synd
Synechococcus sp. KORDI-52
Pathway
synd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KR52_14150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synd03019
]
KR52_14150
03016 Transfer RNA biogenesis [BR:
synd03016
]
KR52_14150
Enzymes [BR:
synd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KR52_14150
Messenger RNA biogenesis [BR:
synd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KR52_14150
Transfer RNA biogenesis [BR:
synd03016
]
Prokaryotic type
tRNA degradation factors
KR52_14150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
PCB_OB
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AII50265
UniProt:
A0A076HK97
LinkDB
All DBs
Position
2512178..2514343
Genome browser
AA seq
721 aa
AA seq
DB search
MQGQTQSISFDGREIRLTTGRFAPQAGGSVLVECGDTAVLVTATRSGGREGIDFLPLICD
YEERLYAAGRIPGSYMRRESRPPERATLTARLIDRPMRPLFPSWLRDDLQVVATCLSLDE
RVPADVLAVTGASIATLLAGIPFNGPMAAVRVGLLGDDFVLNPSYREIERGDLDLVVAGT
PDGVVMVEAGANQLPEQDVIEAIDFGYEAICELIKAQEQLLKDLGITQVKPEKPEEDSTV
PAYLEKQCSKAISAVLSKFDQSKEERDTALETVKGEVSETIAGLKEDHAVRQALASSPKL
LGNSFKALTKTLMRQQILKDGKRVDGRGLDEVRQISAMAGVLPRRVHGSGLFQRGLTQVL
STATLGTPSDAQEMDDLHPNTEKLYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERAI
LPVLPEKDTFPYVVRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPLKAPVSGAAMGLIKE
GDEVRILTDIQGIEDFLGDMDFKVAGSEKGITALQMDMKITGLSVKTVAEAVNQARPARL
HILEKMLEAIDTPRDNLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGAAAEEAQKIIEGLTRKVNEGEVFSGSITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDEVTVRVREIDNRGRINLTLRGVPQAGDAAEVEPQPTPVAPL
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggacaaacccagtcgatctcctttgacggacgcgagattcgactgaccaccggg
cgcttcgcccctcaggcgggaggatccgtcttggtggagtgtggcgacaccgccgtgctt
gtgaccgcaacccgctcgggggggcgtgaaggcattgattttctgccgctgatctgcgac
tacgaagagcggctttatgcagctggccgcattcccggcagctacatgcgtcgtgagagc
cgcccacccgaacgcgccacgctcacggctcgactgattgatcgccccatgcggccgctg
ttccccagctggctgcgcgacgacctgcaggtggtcgccacctgcctatccctcgatgag
cgggtccccgccgatgttctggcggtgacgggcgcatcgattgccacgctgctcgcgggc
atccccttcaacggcccgatggcagccgtgcgggtgggcctgctgggggatgacttcgtc
ctcaacccgagttaccgggaaatcgaacggggtgatctcgacctggtggtcgccggcacc
ccagatggcgtggtgatggtcgaggccggtgccaaccagctgcccgagcaggacgtgatc
gaggcgatcgatttcggctacgaagcgatctgcgaactgatcaaggctcaggaacagctg
ctcaaggatctgggcatcacccaggtgaagccggagaagcctgaagaagacagcaccgtt
cccgcctatctggagaaacagtgcagcaaagcgatcagcgctgtgctcagcaagtttgat
caaagcaaggaggagcgggacacagccctggaaactgtgaagggcgaggtgtccgagacc
atcgcgggtcttaaagaagaccatgccgttcgccaggctctggccagcagcccgaaactg
ctcggcaacagcttcaaggctctgaccaagacattgatgcgtcagcagattctcaaggac
ggcaagcgtgttgacggacgcggcctcgacgaggtgcgtcagatcagcgccatggccggc
gtgctgccgcgccgggtgcatggctccggtctgttccagcgcggactgacccaggtgctc
tccactgcaacgctgggcacccccagcgatgctcaggagatggatgatctccatcccaac
accgagaagctatacctgcaccattacaacttcccgccctattccgtcggtgaaacgcgg
ccgatgcgctcccccggtcgacgtgagatcggccatggcgccctggccgagcgggccatt
cttccagtacttcccgagaaggacaccttcccttacgtggtgcgtgtggtgagcgaagtg
ctcagctccaatggctccacctcaatgggttccgtctgcggcagcaccctgtcgctgatg
gatgccggtgtgccgttgaaggccccggtgagtggcgctgccatgggtctgatcaaggaa
ggtgatgaggttcggatcctcaccgacatccagggcatcgaggacttcctcggtgatatg
gacttcaaggtggccggtagcgaaaagggcatcaccgccctgcagatggatatgaagatc
accggcctctccgtgaagacggtggccgaagccgtgaatcaagcgcgcccggcacggctc
cacatcctcgagaagatgctcgaggcgatcgacacccctcgggacaacctgtctccccat
gccccacgtctgctcagcttccggattgatcctgagctgatcggcaccgtgatcggcccc
ggtggacgcacaattaaaggcatcaccgagcgcaccaacaccaagatcgacatcgaggac
ggtggcatcgtgaccatcgcctcccacgatggtgctgcggctgaagaagcccagaagatc
atcgaaggcctaacccgcaaggtcaatgaaggcgaggtgttctccgggtcgatcacacgg
atcatcccgatcggagccttcgtggagatcctccctggcaaggagggcatgatccacatc
tcgcagctctccgaagctcgtgtcgaaaaggtcgaagacgtggtgaaggtgggcgacgag
gtgactgttcgggtgcgcgaaatcgacaaccgcggccgcatcaacctcaccctacgaggc
gtgccccaggccggcgacgccgccgaagtggagcctcagcccaccccggtggcaccgctc
aactga
DBGET
integrated database retrieval system
