Synechococcus sp. PCC 6312: Syn6312_0624
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Entry
Syn6312_0624 CDS
T02370
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syn6312_0624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syne03019
]
Syn6312_0624
03110 Chaperones and folding catalysts [BR:
syne03110
]
Syn6312_0624
03029 Mitochondrial biogenesis [BR:
syne03029
]
Syn6312_0624
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syne04147
]
Syn6312_0624
Enzymes [BR:
syne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Syn6312_0624
Messenger RNA biogenesis [BR:
syne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Syn6312_0624
Chaperones and folding catalysts [BR:
syne03110
]
Heat shock proteins
HSP60 / Chaperonin
Syn6312_0624
Mitochondrial biogenesis [BR:
syne03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Syn6312_0624
Exosome [BR:
syne04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Syn6312_0624
Exosomal proteins of other body fluids (saliva and urine)
Syn6312_0624
Exosomal proteins of breast cancer cells
Syn6312_0624
Exosomal proteins of colorectal cancer cells
Syn6312_0624
Exosomal proteins of bladder cancer cells
Syn6312_0624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1382
Motif
Other DBs
NCBI-ProteinID:
AFY59845
LinkDB
All DBs
Position
complement(624122..625783)
Genome browser
AA seq
553 aa
AA seq
DB search
MSKIVIFHEESRRSLEKGINALADAVRITLGPKGRNVVIEKSYGAPQIINDGVTIAKEIE
LEDPLENTGAQLMREVASKTNDVVGDGTTTATVLAQALIQEGLKNVAAGANPVALRRGID
KAIAAVVTGIEAVAKPVTGDMIAQVASVSAGNDPEVGAMIAKAMNKVGKDGVITVEESKS
LSTELEVVEGMQFDRGYISPYFVTDAERMIAEFNDAFLLIVDKKISSIQDLIPALEGVAR
SGRPLVILAEDIEGEALATLVVNKLRGVLNTIAIKAPAFGDRRKAMLQDIAVLTGGQVIS
EEIGLTLDQVEVGMLGQASKVTVTKDTTTILSSGGTEAAVKERVAQIRKQLEASDSEYDK
EKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLLHL
TEKITALLPTLSGEEQTGAKIVIKALEAPLAQIANNAGQEGAVVVENVRAADFNIGFNAA
TGAYEDLIASGIIDPAKVVRSGLQNAGSVAGLVLTTEALVVEKPEPKSAMPAGGPGGMGG
MGGMGGMGGMGMM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatcgtcattttccacgaagaatcccgccgctcactcgaaaaagggattaat
gccctggccgatgccgtgcggattaccctcggccccaaaggcagaaatgttgtgattgaa
aaaagctatggcgcgccccaaatcattaatgacggtgtcaccattgccaaagaaattgaa
cttgaagatcccctcgaaaacacgggcgcgcagttaatgcgggaagtcgcctccaaaacc
aatgatgtggttggtgatggcacaacaaccgcgacggttttagcccaggccctgatccaa
gaaggcctgaaaaatgtggctgccggagccaaccctgtggccttacgccgaggaattgat
aaagccattgccgcggtggtgacggggattgaagccgttgctaaaccagtgactggcgat
atgattgcccaggtggccagtgtttccgccggtaatgacccggaagtgggagccatgatt
gccaaagccatgaataaagtcggcaaagatggggtgatcaccgtagaggaatccaaatcc
ctcagcaccgaacttgaagtcgtggaagggatgcagtttgaccgcggctacatttccccc
tactttgtcaccgatgccgagcggatgatcgctgaatttaacgatgccttcttgctgatt
gtggacaaaaaaatcagcagcatccaagacttaattcctgccctggaaggggtagcccgt
tctggccgtccgttagtgattttggcggaagacattgaaggcgaggccctagctaccttg
gtggtcaacaaactccggggagtcctcaacaccattgctatcaaggctccagcctttggg
gatcgccgcaaagccatgttgcaggatattgccgttctcacgggcggacaggtcatctcg
gaagaaattggtctcaccttagatcaagtagaggtcggaatgctcggccaggccagtaag
gtgacggtgacgaaagacacgacgacgatcctcagcagtggcgggacagaagctgccgtg
aaggaacgggtcgcccaaatccgcaaacaactggaagcgagcgattctgaatacgacaag
gaaaaactccaggaacggattgccaaattggccggcggtgtggcggtgatcaaagttggg
gcggccacggaaaccgaactcaaggatcgcaaacttcggattgaagatgccctgaatgcc
accaaagccgccgttgccgaggggattgtgccggggggtgggacaactctgttgcattta
actgagaaaatcacggctctcttgcccacgctgtccggggaagaacagaccggagccaaa
attgtcatcaaggccttggaagctcccctggcccaaattgccaataatgccggtcaagaa
ggggctgtggttgtcgaaaatgtccgggcggctgacttcaacatcgggtttaatgcggcc
actggcgcctatgaagacctgattgcctccgggattattgacccagccaaagtcgtgcgt
tcgggcctgcaaaatgccggttctgtcgctggactggtcttaaccactgaagccttggtt
gtcgaaaagcctgaacccaaatctgcaatgccggccggtgggcctggtggtatgggcggg
atgggtggcatgggaggaatgggcgggatgggcatgatgtag
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