Synechococcus sp. PCC 6312: Syn6312_0679
Help
Entry
Syn6312_0679 CDS
T02370
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
syne
Synechococcus sp. PCC 6312
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
FHA
PAS
PAS_8
PAS_4
PAS_9
Yop-YscD_cpl
2OG-FeII_Oxy_2
Motif
Other DBs
NCBI-ProteinID:
AFY59899
UniProt:
K9RRL8
LinkDB
All DBs
Position
679655..682183
Genome browser
AA seq
842 aa
AA seq
DB search
MKSPEEQIRHLLVIQDKNGRRTIPLEAGTYSIGRHPSNTIVVNSRMVSRQHAVLLRVSDP
QTGNFFFRLLDGDLQGKRSANGLKVNGKTCHSHILKHRDLIIFGGDVRARYHAISNLSDT
GFSRYTQEAQFASMPVSVRDSLPYQPSSLDVAQAKMLSDAAILRLSSFPELSPNPILELD
QTGQITYLNPAAIREFKDIQANDSQHPLLMDLLLPTESQAQPLRIREVQLGHSHYEQVIQ
PLPEANLVRCYITNITERKLAQRALQESEERYAIAAQGANDGLWDWDLRTNEIYFSDRWK
QMLGLANVETSPSPETWLEAIYPEDRTHVQIEIEQHLSGVTPHLECEFRVLHPDGGLRWM
RVRGLGLRDERQQPYRMAGSLTDITEYRLIQEQILHDALHDAMTGLPNRILMMDRLGQAM
QRAKRRPGYLFAILFLDLDRFKVLNDSLGHLVGDQLLIGIAQRLVSCLRAEDTIARLGGD
EFAILLDEVGTVDYACQVAERILTELRRPFILEGHEVFTGVSIGIAFNTQEHLQPEDLLR
DADTAMYRAKSLGKDRYEVFSTAMRVEVLALLQLETELRRAVERQEFMVYYQPIVDLAQA
RICGFETLIRWQHPRRGVITPGEFMDIAEETGLILPMSWWVLETACEQMQQWSRQFPTSQ
GLAISVNLTGQHFAQPDLVSRLDNILTATQFSPHRLRLEVTETILMENTELAVQALESIR
TRGIQIYMDDFGTGYSSLSYLHRFPIDTLKIDRCFISPLLHPDIQGGGIVQTILTLAKSL
HLNVVAEGVETEAQCQALQRMGCTYAQGYLFAPPLSAAHIEDILAKESLDISCLQASRLN
AS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagtcccgaagaacaaattcgccacctcttggtgattcaagataaaaatggccgc
cgaaccattccccttgaggcgggaacttactccattggtcgtcaccccagcaataccatc
gttgttaattcccggatggtctctcggcagcacgccgttttattacgagtttctgatccg
caaacgggtaattttttctttcgcttactggatggagatctccagggcaagcggagtgcc
aatggcctgaaggtgaacggcaagacctgtcactcccatattttgaagcatcgagattta
attatctttgggggagatgtccgcgcccgctatcatgccatttctaacctttcggatact
gggttttcccgctatacccaagaggcccagtttgcgagtatgcccgtgagtgtccgggat
agcttaccctatcaaccctcttccctggatgttgcccaggccaaaatgctcagtgatgcg
gccatcttacgtctttcctcctttcctgaattaagccccaaccccatcctggaattggat
caaaccgggcaaattacctatctcaatccggcggccattcgggagtttaaggacatccag
gccaatgattcccaacaccccctgctgatggatctgcttttaccaacggaatcccaggcc
caacccctccgcatccgggaagtccaactgggtcattcccattacgaacaagtcattcaa
cccctccctgaagccaacttagtccgttgctacattaccaacatcacggagcgtaaactg
gcccaacgagccctccaagaaagtgaagaacgctatgccattgcggcccaaggtgccaat
gatggtctttgggattgggatttacggactaacgaaatctacttttcagatcgctggaaa
cagatgcttggcctggctaatgttgagacttctccaagcccagagacatggcttgaggcg
atttatcccgaggatcgaacccatgtccaaattgaaattgaacagcatttatctggcgtg
accccccatttagagtgcgagtttcgagttttacacccggatggaggcctgcgttggatg
cgcgtccggggcctgggcctacgagatgagcgtcagcaaccctatcggatggccggctcc
ctcaccgatattaccgagtatcgcctgatccaagagcaaattctccatgatgcccttcac
gatgccatgaccgggctacccaatcgcatcttgatgatggatcgactcggccaggccatg
cagcgggccaaacggcggcctggttatttatttgccatcttatttttagatttagatcgc
tttaaggttctcaatgacagcctggggcatttggtcggcgatcaacttttaattgggatt
gcccagcgtctagtcagttgtctgcgggctgaagataccattgcacggctagggggggat
gaatttgcaattctcctcgatgaagtggggacagtggactatgcctgccaagtggcggag
cggatcctgacggaattgcgccgaccgtttattttagagggccatgaggtatttactggg
gtgagcattggcattgcctttaatacccaagagcatctccaaccggaagacctcctgcgg
gatgcggataccgccatgtatcgggctaaatccttggggaaagatcgctatgaagtcttc
agtaccgccatgcgggtggaagttttggccctcctgcaactggaaacagaactacggcgg
gcggtggagcgacaggaatttatggtctattaccaaccaattgtggacttggcccaggcc
cggatctgtggctttgaaacgctgattcgttggcagcatcctcggcgcggtgtgattacc
ccaggagaatttatggacattgccgaggaaacggggctgattttacccatgagttggtgg
gttctagaaacggcctgtgaacaaatgcaacagtggtcacgccaatttcctacctctcag
ggcctggccatcagtgtcaatctcacgggccagcactttgcccaacccgacttagtttcc
cgcttagataatattctgactgcaactcaattttccccacaccgactgcgcttggaagtg
accgaaaccattttgatggaaaatacggaactggcggtgcaagccctagaatccatccgc
acccgcggcattcaaatctacatggatgacttcgggacgggatactcgtctctgagctat
ctccaccgttttcccattgacactctcaaaattgatcgctgctttattagcccgctcctt
caccccgatattcaagggggcggcattgtccaaaccattctcaccctggcaaaatcctta
cacctgaatgtcgtggccgaaggggttgaaaccgaagcccaatgccaggccctgcaacgg
atgggatgtacctatgcccagggctatttgtttgccccacccctatctgcggcccacatt
gaggacatcctagccaaagaatccttggacattagttgtctccaagcctcgcgtctgaat
gcctcatag
DBGET
integrated database retrieval system
