KEGG   Synechococcus sp. PCC 6312: Syn6312_0882
Entry
Syn6312_0882      CDS       T02370                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
syne  Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:syne00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:syne02048]
    Syn6312_0882
Enzymes [BR:syne01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Syn6312_0882
Prokaryotic defense system [BR:syne02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Syn6312_0882
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII CbtA_toxin AAA_22
Other DBs
NCBI-ProteinID: AFY60090
UniProt: K9RQ60
LinkDB
Position
complement(868743..871883)
AA seq 1046 aa
MSFVTEDDIEQVLIEQLQHLGYHYLPDSVANPDGTAPERESYADVILPQRLRDALDRLNP
TIPATARDDAFKKLIATEKPNLIEENRRLHQLLIEGIDVEFYSDDGTIRGDKVYAIDFAQ
PEQNDWLVLNQFTVIEAGQNRRSDVVVFVNGLPLAVIEIKNPGTETATLAAAYNQLQTYK
AQISSLFRTNAVLVTTDGLMARIGSLTADLERFMPWRTTDGETIAPKGTPEMSTLVEGVF
TKRHLLNLIQNFTVFGDDGTGITKIIAGYHQFHGVQKAIAKTIAATHQTGDRKAGVIWHT
QGSGKSLLMAFYVGQLVRRPELENPTIVVITDRNDLDDQLFATFAMCRDLIRQTPQQANS
REDLQTLLNQVSGGVIFTTIQKFAPPTGETRYPVLTERRNVIVIADEAHRSQYGFKAKVD
QKSGVIAYGFAKYLRDALPHASFIGFTGTPIEASDVNTPAVFGNYIDIYDISRAVEDGAT
VPIYYESRLARIELPEDEKPKIDAEIEDLIDDEDSDQARLSQKWATVQALVGAEKRLKQV
ARDLVTHFENRITALKGKAMIVCMSRAICVKLYNHIIELRPDWHSDDEQAGIIKIVMTGA
ASDPPEWQPHIGNKARRDLMAKRLKDPTDPLQLVIVRDMWLTGFDAPALHTMYVDKPMKG
HGLMQAIARVNRVFRDKPAGLVVDYIGIGQRLREALRDYSAQDQRQTGIDEAEAVALMLE
KYDVVRAMFHGFNYQRGLDGTPQERLVVMAEAMEWILDQQHQAALQETEPTKQKQARRRY
QDAVLALSKAFALAAASDEARSIRDEVGLFQTIRAALVKSTTGPGQSAAEREFAVQQIID
RAVVSTEIVDILSAAGLSSPDISILSDDFLLEVRQMEKKNLAIEALRRLLNDEVRSRSAN
NITQQKKFSERLEQAIARYHTNALSTVEVIQELINLAQDIKAAKARGENQGLSADEYAFY
DALAENQSAVEVMGNEQLKIIAHELLVSLKSNVTVDWAHRESARARLRTIVKRILKKYGY
PPDMQAMAVQTVLQQAEALSAHWDRA
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgagttttgttaccgaagacgacattgaacaggtactcatcgagcaactgcaacacctc
ggttatcattacctgcccgatagtgttgctaaccccgatggcacagcccccgagcgggaa
tcctatgccgatgtcattctgcctcaacggttgcgggatgccctagatcgcctaaaccct
accattcccgccactgcccgcgatgatgccttcaaaaaactaattgccaccgaaaagccc
aacctcatcgaagaaaaccgccgtctgcatcaactcctcatcgaaggcattgatgttgag
ttctacagtgacgatggcaccattcgcggcgataaagtgtatgccattgactttgcccag
cctgaacaaaacgactggttagtgctaaaccaatttaccgtcatcgaagcaggccagaac
cgccgctcagatgtcgtggtctttgtgaatggcttgcccctggcagtgattgaaattaaa
aatcctggcaccgaaaccgccaccctcgccgccgcctataaccaactgcaaacctacaaa
gcccaaattagctccctgttcagaaccaacgccgttctggtcacaaccgatggcctcatg
gctcgcattggctccctaaccgcagacttagaacggttcatgccctggcgtaccacggat
ggcgaaaccattgcccccaaaggcacaccggaaatgtccaccttagtcgaaggggtattt
accaaacgccacctcctgaacctgatccaaaatttcaccgtctttggcgacgatggcaca
ggcattaccaaaatcattgcgggctatcaccaattccacggtgtccagaaagccatcgcc
aaaaccatagccgctacccatcaaaccggagatcgcaaagcgggggtcatctggcatacc
caagggtcaggcaaaagtttactgatggccttctatgtggggcaactggttcgccgtcct
gagctagaaaaccccaccattgtcgtgattacagatcgcaatgatctagacgatcaactc
tttgccacctttgccatgtgccgggatttgattcgccaaacaccccaacaggccaatagc
cgggaagacctgcaaacccttcttaatcaggtatccggcggcgtcatctttaccacaatc
caaaaattcgctccccccactggagaaacccgctaccccgttttaaccgagcggcgcaac
gtcatcgtcatcgcagatgaagcccacagaagccagtatggatttaaggccaaagtggat
caaaaaagtggggtgattgcctatggctttgccaaatatttgcgggatgccctaccccat
gcctcctttattggctttactggaacccccatcgaagccagtgatgtgaatacgcccgct
gtctttgggaactacattgatatttacgacatcagccgggctgtagaagatggggcaacc
gtgccaatctactatgaaagccgtttagcccggattgagctaccagaggatgaaaaaccg
aaaattgatgccgaaattgaagacctgattgatgatgaggattcagaccaggcccgcctc
agtcaaaaatgggccaccgtgcaagccctcgtcggagccgaaaaacggttaaaacaagtc
gccagagatttagtcactcattttgaaaaccgaatcaccgccctgaagggtaaggccatg
atcgtttgcatgagccgggccatttgcgtcaaactctacaaccatattattgaactgcga
cccgattggcactcagacgatgaacaagccggaatcatcaaaattgtgatgaccggggca
gcgtccgaccctcccgagtggcaaccccacattggcaataaagctcgccgggatttgatg
gctaaacggctgaaagaccccaccgaccccttgcaactggtgattgtcagggatatgtgg
ctaaccggctttgatgccccggccctgcacacgatgtatgtggataaaccgatgaaaggc
catggtctgatgcaagccattgcccgtgtgaaccgcgtctttcgggataagcctgctggc
ctggtggtggactatatcggcattggtcaacggttgcgggaagccctccgtgattattca
gcccaagaccaacgccagaccgggattgatgaagccgaagccgtggccctgatgctggaa
aaatacgatgttgtccgggctatgtttcatgggtttaattaccagcggggcctggatgga
acaccccaagagcgattggtggttatggctgaggcgatggagtggatattagaccagcaa
caccaagctgccctccaagaaacagaaccaaccaagcaaaaacaggcccgccgccgttat
caggatgcagtcttagctctctccaaagcctttgctttagccgccgccagtgatgaagct
cggtcaattcgggatgaagtgggactattccaaaccattcgggcagctttagtgaaatct
acaaccgggcctgggcagtcagccgccgagcgagaatttgctgtccaacaaattattgat
cgggctgtagtctctaccgaaattgttgatattctcagtgccgctgggctttcttctcct
gatatttctattctatccgatgactttttattagaagtgcggcaaatggagaaaaaaaac
ttggcgattgaggccttaagacgattactcaatgatgaagttcgctcccgcagtgccaac
aatattacccagcagaaaaagttttcagagcggttagaacaagccatcgcccggtatcac
accaatgccctcagtaccgttgaagtgatccaagagttaattaatctggcccaagacatc
aaagcagccaaagcacgaggggaaaaccaagggctatcagcggatgagtatgccttctat
gacgctctagccgaaaaccaaagtgcagtcgaagtcatgggaaatgaacagttaaagatc
atcgcccatgagttgctggtcagtttgaagtctaatgtcacggttgactgggcccaccgt
gaaagtgccagggccaggcttcggacaatcgttaaacgtatccttaaaaaatatggttat
cccccagatatgcaagcaatggccgtccaaactgtcctccaacaggccgaagcgctttct
gcccattgggacagagcttaa

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