Synechococcus sp. PCC 6312: Syn6312_0963
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Entry
Syn6312_0963 CDS
T02370
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne00900
Terpenoid backbone biosynthesis
syne01100
Metabolic pathways
syne01110
Biosynthesis of secondary metabolites
Module
syne_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Syn6312_0963
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
syne01006
]
Syn6312_0963
Enzymes [BR:
syne01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Syn6312_0963
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Syn6312_0963
2.5.1.29 geranylgeranyl diphosphate synthase
Syn6312_0963
Prenyltransferases [BR:
syne01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Syn6312_0963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFY60164
UniProt:
K9RS99
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All DBs
Position
946458..947402
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AA seq
314 aa
AA seq
DB search
MISAENLQVQAAPASRESGVEFNLKTYLQDRKALVEQALEASITITYPEKIYDSMRYSLL
AGGKRLRPILCLATCELLGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTN
HKVYGEDIAILAGDGLLAYAFEFVVENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDL
ESEGITEITIETLNFIHSHKTGALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIV
DDVLDITSTQEELGKSIGKDIQAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPFGAAAI
PLQAIADFITARTH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatctcagccgaaaatttacaggttcaagccgcaccggcctccagggaaagtggggtt
gagtttaatctgaaaacctatctgcaagaccgcaaagccttggtcgaacaggcccttgag
gcttccattactatcacctatcccgaaaaaatttatgactccatgcgttattccctgtta
gccggggggaagcggttacggcccattctctgtttggcgacctgtgagttgttgggggga
acccttgaaatggccatgcccaccgcctgcgccctagagatgatccacaccatgtctctg
atccacgatgatctcccggcgatggacaacgacgactaccggcgcggcaaactgactaat
cataaggtttacggggaagacattgcgattttagccggggatggcttactggcctatgcg
tttgaatttgtggtggaaaacaccgttggggtcaaggcagaaaaacttttgaaggtcatt
tcccggttaggtcatgcggtggcggccacgggcctggtcggggggcaggtggtggacttg
gaatcggaggggatcacagagatcaccatcgaaaccttgaatttcatccactcccacaaa
accggggcattactcgaggcctcagtcttatcgggggggctattagctggcgcagagggg
gatgcggtgcagcgcctgaccaactatgcccgcaatattggcctggcgtttcaaattgtg
gatgatgttttggatattacttcaacccaggaagaactgggcaagagcattggtaaagat
atccaggcccagaaagtcacctatcccagtctttgggggattgaagcctcacgggtcgag
gcccaacgccttgtggatttagccaaggccgaactcagtccctttggtgccgctgctatt
cctctccaggccatcgccgactttattaccgcccgcacccactag
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