Synechococcus sp. PCC 6312: Syn6312_0985
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Entry
Syn6312_0985 CDS
T02370
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syne
Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syne03016
]
Syn6312_0985
Enzymes [BR:
syne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Syn6312_0985
Transfer RNA biogenesis [BR:
syne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Syn6312_0985
Prokaryotic type
Syn6312_0985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFY60185
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All DBs
Position
complement(970200..971159)
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AA seq
319 aa
AA seq
DB search
MNNRLQLSGFLNLNKPEGFTSHDCVAKVRRIFRLKRVGHGGTLDPMATGVLPIALGSATR
LLPYLPTEKAYRGVIQLGLVTDTDDITGTIISQANASEITQAQVRQRLDIFQKGYDQLPP
AYSAVQIEGKRLYQLARNGQRIDIPTRWVDIFNLEVLAWQPGPTPTLELSIRCGPGTYIR
AIARDLGAALGVGGTLVSLVRTKSCGFELVNALTLGDLSPESTTLISPGLALQHLPAIKL
DSEIAKRWCCGQKMAIETVNLTTPYQVLDQAGTLLGIGQLEDDIFRAKVVLPSHIDHSMD
NNASTRNNSHDPPADDLSR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaataataggctgcaattatctgggtttcttaatctgaataaaccagagggatttacc
tcccatgattgtgtggctaaggtgcggcggatttttagacttaagcgggttggtcatggc
ggaacgttagatccaatggcaactggggtgttaccaattgccttaggttctgcgacccgt
ttgttgccctacttgcccacagaaaaagcctatcgaggggtgatccaactgggcctggtg
accgatacagacgacataacaggaacaattatttctcaggccaatgctagtgaaataact
caagcacaggtgaggcaaaggttagacatctttcaaaaggggtacgatcaacttccaccg
gcctatagtgccgttcaaattgaggggaaacgactctaccagttagcccgaaacggtcaa
aggattgatatcccgacacgctgggttgatattttcaatcttgaggttttagcttggcaa
cccggcccgaccccaacattggaactatccattcgctgtggccccggaacctatattcgc
gccatcgctagagacttgggtgcagctttaggtgttgggggaactttagttagcttagtt
cggacaaaaagttgtggatttgagttggttaatgcgctgactcttggtgatctcagccca
gaatctacaactttaatttccccaggcctggctctgcaacatctcccagccattaaattg
gactcagaaattgctaaacgctggtgttgtgggcagaaaatggcgattgaaaccgtaaat
ttaaccactccctatcaagtgttggatcaagccggaacattactcggcattggtcagctt
gaagacgatattttccgtgctaaagttgtcctccctagccacattgatcattcaatggac
aacaatgcttcgactagaaacaactcgcatgatcctccggccgatgaccttagcagatag
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