Synechococcus sp. PCC 6312: Syn6312_1174
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Entry
Syn6312_1174 CDS
T02370
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
syne
Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syne03032
]
Syn6312_1174
03036 Chromosome and associated proteins [BR:
syne03036
]
Syn6312_1174
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_1174
DNA replication proteins [BR:
syne03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Syn6312_1174
Chromosome and associated proteins [BR:
syne03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Syn6312_1174
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Syn6312_1174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFY60359
UniProt:
K9RSW0
LinkDB
All DBs
Position
1135842..1136120
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AA seq
92 aa
AA seq
DB search
MNKSKLIEVAAEAAEFTKKDMEIALNAVLDAIQNAVAAGSEVKLVGFGTFKPIFAQAREG
RNPQTGESIKISATHKPVFRAGQGFKDKVARR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtccaaactaatcgaagtggcggccgaggctgctgagtttacgaaaaaagac
atggaaattgccctcaatgccgtcttggatgccatccaaaatgccgtggccgctggctct
gaggtgaaattggtcggatttggtacgttcaagccgatttttgcccaggcccgtgagggt
cgcaatccccagacgggtgaaagtatcaagatatcggctactcacaagcctgtgtttcgg
gcgggtcaagggttcaaggataaggtggctcggcgatga
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