KEGG   Synechococcus sp. PCC 6312: Syn6312_1186
Entry
Syn6312_1186      CDS       T02370                                 
Name
(GenBank) CRISPR-associated exonuclease, Cas4 family
  KO
K15342  CRISP-associated protein Cas1
Organism
syne  Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:syne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syne03400]
    Syn6312_1186
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:syne02048]
    Syn6312_1186
DNA repair and recombination proteins [BR:syne03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     Syn6312_1186
Prokaryotic defense system [BR:syne02048]
 CRISPR-Cas system
  Universal Cas proteins
   Syn6312_1186
SSDB
Motif
Pfam: Cas_Cas1 Cas_Cas4 PDDEXK_1
Other DBs
NCBI-ProteinID: AFY60371
UniProt: K9RS69
LinkDB
Position
complement(1150662..1152326)
AA seq 554 aa
MLALPTQAPPTTPTIRVSALHALAYCPRLFYLEEVEELYTQDAAVFAGRRLHVELQKQED
EDWEELNLESETLGIRGRVDALRTRNGQVIPYEHKRGRCYRDQNKQPQAWASDELQILAY
AYLIEEALNIPIQEGRIRYHADNVMVRVPLTTAGRQKVLTAIQQAQALRQSLQRPPVATN
EKLCASCSLAPVCLPEEARLTQDPDRATFRLFPRDDDREIIHVLTPGSKVGKSGEQIKIS
HRDQPEEKLPAQRVSQVVLHSFSQISTQALHFCASRDIGVHFITGGGRYIGSFDSRQGSI
QRRIRQYQALSDPQVCLHLAKLLVTCRGQSQRKFLMRGQRGKSDVLTTVTPIIEQMQAVL
KQIEPVNSLESLLGLEGNLASLYFSALPALLTERIPAELQFSGRSRRPPKDPFNALLSFG
YALLLKDVMNGILTVGLEPALGFYHQPRSQAAPLALDLMEIFRVPLVDMVVVASINRQQW
DISTDFECRGAQVWLSESGRRKFIDAYERRKQEKWKHPVTNYSLTYRRLLELEVRLLEKE
WMGEPGLFAKLVVR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgcttgcactccccacccaggccccgccaactaccccaacgatccgagtctctgccctc
catgccctggcctactgcccgcgattgttttacctagaagaagtcgaagaactttatacc
caagatgccgccgtgtttgccggccgacgacttcatgtggaattgcaaaaacaagaagat
gaagattgggaagaactcaatctggaaagcgaaaccttggggatacggggccgggtggat
gccctgcgaactcgcaatggtcaggtcattccctacgaacacaagcggggacgctgctac
cgagatcagaataaacaaccccaggcctgggccagtgacgaactccaaatcttagcctat
gcctatctgattgaagaggcgttaaatattccgatccaggaaggtcgaattcgctatcat
gccgataacgtcatggtaagagttcccctcacaactgccggccgccaaaaagtcctgacc
gccatccaacaggcccaggccctgcgccaatctctccaacgcccacctgtagcaaccaat
gaaaaactctgtgccagttgttcccttgcccctgtctgtctaccggaagaagcccgttta
acccaagaccccgaccgtgccaccttcagactttttccccgagatgatgaccgggagata
attcatgtcctcaccccaggctcgaaagttggtaaatccggggagcagatcaagatcagc
catcgagaccagcctgaggaaaaattaccggcccaacgggtgagtcaagtcgttctccac
agcttttcgcaaatttcgacccaggccctgcacttttgtgccagtcgcgatattggggtg
cattttattaccgggggcggtcgctatatcggcagttttgattctcgccaaggcagtatt
caacgccggattcgccaatatcaagccctcagtgatccgcaagtctgtctacatttagcc
aaattactcgtcacctgtcgaggccaaagccagcgcaaatttctcatgcggggccaacgg
ggcaaatctgatgttctgacaaccgtcaccccgattattgaacaaatgcaggccgtgctg
aaacaaatcgagccagtcaactctttggaatcacttctgggcctggaagggaaccttgcc
tctctctatttttcagccttgcccgccctattaaccgagcgcattccagcagaattgcaa
ttttccggccgcagtcgccgccccccgaaagacccatttaatgcgctgctcagttttggc
tatgccctgctgctcaaagatgtcatgaatggaattctcaccgttggcctggagccggct
ctgggcttttaccatcaaccccgctctcaagctgcccccttagccctagatttgatggaa
attttccgagtacccttggtggatatggttgtcgtggcttcaattaatcgccagcaatgg
gacatcagtacagattttgaatgtcggggtgctcaagtttggctgagtgagagtggccgc
cggaaatttattgatgcctatgaacgacgcaagcaagaaaagtggaaacatcccgtcacg
aattactccctcacctatcgccgtttattggaattagaagtgcgtctgttggaaaaagaa
tggatgggtgagccgggtttatttgccaaactagtggtgcgctga

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