Synechococcus sp. PCC 6312: Syn6312_2007
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Entry
Syn6312_2007 CDS
T02370
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase, large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne00630
Glyoxylate and dicarboxylate metabolism
syne00710
Carbon fixation by Calvin cycle
syne01100
Metabolic pathways
syne01110
Biosynthesis of secondary metabolites
syne01120
Microbial metabolism in diverse environments
syne01200
Carbon metabolism
Module
syne_M00165
Reductive pentose phosphate cycle (Calvin cycle)
syne_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Syn6312_2007
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Syn6312_2007
Enzymes [BR:
syne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Syn6312_2007
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AFY61139
UniProt:
K9RV09
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Position
1977136..1978563
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AA seq
475 aa
AA seq
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MSYAQKAPGKAGYKAGVQDYRLTYYTPDYTPKDTDILAAFRVTPQPGVPYEEAAAAVAAE
SSTGTWTTVWTDLLTDLDRYKGRCYDIESVPGEDNQFIAYIAYPLDLFEEGSVTNLLTSL
VGNVFGFKALKALRLEDLRIPVAYLKTFQGPPHGIQVERDKINKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKAQAETGEVKGHYL
NVTAATCEEMLKRAEFAKELEMPIIMHDFLTGGFTANTTLAHWCRDNGVLLHIHRAMHAV
IDRQKNHGIHFRVLAKCLRMSGGDHIHTGTVVGKLEGDKAITLGFIDLLRENYIEQDRSR
GVYFTQDWASMGGVMAVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATAN
RVALEACVQARNEGRDLMREGGDIIREACKWSPELAAACELWKEIKFEFEAVDTV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgcacaaaaagcccccggtaaagctgggtataaagccggggtgcaagactat
cggttaacctattacacaccggactacacccccaaagatacagatattttggccgcgttt
cgggtcactccccaacccggtgtgccctacgaagaagcagcggcggcggtggcggccgaa
tcttcaaccgggacttggacaacggtgtggacagatttactcactgacttggatcgttac
aaaggtcggtgctacgacattgaatccgttcctggtgaagacaatcaattcattgcctac
attgcctatcccctggatttgtttgaagaaggctctgtcaccaacctcttgacctccttg
gtcgggaacgtttttggctttaaagccctgaaagccctccgtttagaagacttgcggatt
ccggtggcttacctgaaaaccttccaaggccctccccacggaattcaagttgagcgggac
aaaattaacaagtatggtcgtcccctcttgggttgtacgattaagccgaaattgggctta
tcggccaaaaactacggtcgggccgtctatgagtgcctccggggtggtttagacttcacc
aaagacgacgaaaacatcaactcccaacccttccaacgctggcgggatcgcttcctgttt
gtggcggatgcgattcataaagcccaggccgagacgggagaagtcaaaggtcactacctc
aacgttaccgctgccacctgtgaagaaatgctgaagcgggccgagttcgctaaagaactg
gaaatgccgatcattatgcatgacttcttgaccggtgggtttaccgccaacacaaccttg
gcccactggtgccgggataatggggtcttgctccacattcaccgggccatgcacgccgtc
attgaccgccagaaaaaccacggcatccacttccgggtcttggccaagtgcttgcggatg
tcgggcggtgaccacattcacaccggaaccgttgtcggtaaattagaaggcgacaaagcc
attactctgggtttcatcgacctgctccgggaaaactacatcgagcaagaccgttcacgg
ggtgtttactttacccaggattgggcttctatgggtggggtcatggccgtggcttccggt
gggattcacgtttggcatatgccggccttggtggaaatctttggcgatgattccgtcctc
cagtttggtggtggaaccttgggtcacccctgggggaatgctccgggtgctacagccaac
cgggttgccttagaagcttgcgtccaggcccggaatgaaggtcgtgacttaatgcgcgaa
ggtggcgatattatccgggaagcctgtaagtggtcgcctgaattggcagcggcttgcgaa
ctctggaaagaaatcaagtttgaatttgaggctgtggataccgtctaa
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