Synechococcus sp. PCC 6312: Syn6312_2171
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Entry
Syn6312_2171 CDS
T02370
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03030
DNA replication
syne03430
Mismatch repair
syne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Syn6312_2171
03430 Mismatch repair
Syn6312_2171
03440 Homologous recombination
Syn6312_2171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syne03032
]
Syn6312_2171
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_2171
Enzymes [BR:
syne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Syn6312_2171
DNA replication proteins [BR:
syne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Syn6312_2171
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Syn6312_2171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HTH_17
ArsR
Motif
Other DBs
NCBI-ProteinID:
AFY61288
UniProt:
K9RUY9
LinkDB
All DBs
Position
2121604..2122350
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AA seq
248 aa
AA seq
DB search
MLHSQDILAIYRHLGTSDLTVVDVETTGSQPDHNWVIEISVLQGCPQAGIAKHRTQLIKP
PIPIPKDIQRFTGITPDLVTDAPPPAQAWPEFLPLLETGIFTAHNLPFDYGFIQSEYEKL
NIPFSRPLEAQFCTVKLSRILLSHLKSRRLPDLVRHFDFPVDTSHRAEADTLACWYLTLE
LVNRLEQTPDGPILEKLGQEWLTLEEAAQLLGTDVTTALGELMHPHIVNKCTRRGEILFQ
RHSVERIC
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctccactcccaagacattctggccatatatcgacacctgggaactagtgatttaacc
gttgtagatgtggaaacaacggggagtcaacccgaccataattgggtgattgaaatttct
gttctccagggatgcccccaggccgggattgccaaacacagaacgcaactgatcaaacca
ccgatcccaattccgaaagatattcaacgctttacaggaattaccccagatctcgtcacc
gatgcccccccacccgcccaggcctggcctgaatttttacccctgttagaaaccggaatt
ttcactgcccacaacttgccttttgactatggttttatccagtcagagtatgaaaaacta
aatatcccctttagccgccccttagaggcccaattttgtaccgtcaagctctcccggatt
ttactctcccacctgaaatcccgccgtttacccgatctcgtccgccattttgattttcct
gtagatacctctcatcgcgccgaagcagacaccctggcctgttggtacttaaccctagag
ttagttaaccgcttagaacaaacccccgatgggccaatcctagaaaaactggggcaagaa
tggctcacccttgaagaggctgctcaactgttaggcactgatgtcacaactgccttagga
gaactcatgcatccccatatcgttaacaaatgcacccgccgcggcgagattctcttccag
cgccatagtgttgaacgcatctgttag
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