Synechococcus sp. PCC 6312: Syn6312_2265
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Entry
Syn6312_2265 CDS
T02370
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Syn6312_2265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_2265
Enzymes [BR:
syne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Syn6312_2265
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Syn6312_2265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SSB
LMF1_C
DASH_Spc34
Motif
Other DBs
NCBI-ProteinID:
AFY61380
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Position
complement(2219757..2221049)
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AA seq
430 aa
AA seq
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MLTHNPDLLIPPTVQTVAELTDYIRGILEQDPELIQVCVTGEVSSVNPYPSGLFFTLSDP
TTQATIQCVVWQSSLRKLVTTPSPGEQVIIIGRIQVYGARGTYRLTAWQVLPAGEGLQAL
RLKQLKDRLAAAGCFDPERKRPLPNHPQVIAVVTSMRAAAWGDIQRTLKNRYPGLKVLLS
PALVQGELAPDSIVAALQRIQADGRAEVIILSRGGGAKEDLGCFNDERVVRAIAQCQIPI
IAGIGHQRDETLADLAADVCAHTPTAAAQLAVPSLADLYQEHQQRVARLQTVLQVQWQTT
HRIWQQQQQRLKRVGIQQTLHWEQQHLQRLKTQLQQAALGEWQRESHHHQLLRERLQGLN
PQAILNRGYAIACQASGHTVSQANDLKSGELLTLHLAQGQVKVRVEKIIPSYGMTNPLVA
NQAGLNNRDW
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcactcataaccctgatttactcattccgccaaccgttcagactgtcgctgagtta
acggactatatccggggaattctcgagcaggatccagaactgattcaagtctgcgtgacg
ggggaggtttccagtgtaaatccctacccgagcggcttgttctttaccctcagtgatccc
acgactcaagccacaatccaatgtgtggtctggcagtcttctctgcgtaaattagtcaca
acgccttcacccggtgagcaagttattattattggtagaatccaggtctatggagcccgg
ggcacctatcgcctcacggcctggcaggtattaccagctggggaaggcttacaagccctg
agactgaagcaattgaaagatcgcctcgcagctgccggatgctttgatccagaacgcaaa
cgccccctccctaaccatcctcaagtcattgccgttgtcacctctatgcgggccgcggcc
tggggggatattcaacgcaccctcaaaaatcgttatcccggcctgaaggtactcctgtcg
cccgctttagtgcagggggagctcgcgccagactcgattgttgctgctcttcagcggata
caggccgatggccgggccgaggtgattattttgtcccgcggggggggagccaaagaagac
ttagggtgttttaatgatgagcgggttgtgcgggccattgctcaatgtcagataccgatt
attgctgggattggccaccaacgggatgagaccctcgcagatttagctgccgatgtttgc
gcccatacccccactgctgcggcccaattagctgttcctagtttggctgacctttatcaa
gagcatcagcaacgggtggctagactccagactgtgctccaggttcagtggcaaaccacc
cacaggatttggcaacagcaacagcaacggcttaaacgggttggcattcagcaaacgctg
cactgggaacaacaacaccttcagcgtctcaaaacccaacttcagcaggcagcccttggt
gaatggcaaagggaatctcatcaccatcaactcttaagggagcgattgcagggcctaaac
ccccaggccattttgaatcggggttatgcgattgcctgtcaagcatcagggcataccgtc
agccaggccaatgacctcaaatctggggagcttttgaccctccacttggctcaaggacag
gttaaagttcgagtcgaaaagattatccccagctatggcatgaccaaccctttagtcgcc
aaccaggccggattaaataaccgcgattggtag
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