Synechococcus sp. PCC 6312: Syn6312_2486
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Entry
Syn6312_2486 CDS
T02370
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Syn6312_2486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_2486
Enzymes [BR:
syne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Syn6312_2486
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syn6312_2486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
NACHT
HTH_DeoR
zf-CHY
Zn_Tnp_IS91
TFA2_Winged_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFY61586
LinkDB
All DBs
Position
2434175..2436604
Genome browser
AA seq
809 aa
AA seq
DB search
MPSAPWLNVLLDCPGNPGAFTYAQPPDLIIHPGDLVSVPFGSGQMGGIVIGLLEQLPPDL
LPEQVRPIIEVIQRRFFSLTYWQLLERTAVYYYTPLVQVLKTALPPGLLQRSQRRISLVQ
PCPRSNGLISEKAQQILALLQASPTGDYSWRYIHQKIPRAQAPLAELLKNGWVKSYLRPP
SPPQAKQQQAVILIQASGDHLTARQQEILSYLQQSGGELWLQDLLQACQTSKSTLNTLAQ
KGCITITLRQKLRLEQGLTTAVATPKSLTSAQTQALSHINAATQAQTFLLHGVTGSGKTE
VYIQAIRPRLAEGQSALVLVPEIGLTPQMLDRFQAIFGEQVLVYHSALSEGERYDTWRQL
LLEKPRLVIGTRSAIFLPLHSLGILVLDEEHDSGYKQEQPSPCYHARTLAQWRSELENCP
LILGSATPGLATWQQKLEDKLTYLPLPQRIQARPLPPIEIVDLRNELHQGNRSMFSRTLF
SALENLPASGQALLFIHRRGHSTFVSCRSCGQALECPHCSVSLTYHWPDPQQAPVLRCHY
CNFSRPQPKQCPSCQSPYLKPFGGGTQRAVQELKERLPDLKVIRFDSDTTQRKGAHRQLL
EAFTRQEAQVMIGTQMLTKGMDIENVNLVGILTADGLLHFADFQAGERTFQTLTQVAGRA
GRGDKPGRVILQTYTPEHQVIQAVQAYAYEDFAADELQQRQALNYPPYGQLVLIRLSSPD
PEAVAQTAQTVSTSCQQLTGLNSAEVDILGPAPAPILKVAQRYRWQILLKFNRRQSGQCP
PLPLDVNALRQLCPGNVRLGLDVDPQNFF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgcaccttggctgaatgtattactcgactgtccagggaatcccggagcattt
acctacgctcaacccccagatttgattattcatccgggtgatttagtgagtgttcccttt
ggatctgggcaaatgggtggcattgttattggcctactagagcaactccccccggactta
ctccctgagcaggttcgtcccattattgaagtcattcaacggcgattttttagtctgacc
tattggcaattgctggaacgtactgcggtatactattacactcccctagtccaagtccta
aagacagccctacccccaggcctgttgcaacgctcccaacgccgaatttccctggttcaa
ccatgcccccgcagtaatggtctcatttctgagaaagcccagcaaattttagccctactc
caggccagccccacgggtgactacagttggcgatacattcaccaaaaaattccccgcgcc
caggccccattggcagaactcctgaaaaatggttgggtgaaaagctatcttcgccccccc
agcccgccccaggccaagcaacaacaagcggtgattctcatccaagcctcaggggatcat
ctcacggcccggcagcaggagattctcagctatctgcaacaatctggaggggaactctgg
ctgcaagacctactccaggcctgtcaaacctctaaaagcaccttaaatacactggcccaa
aagggttgcatcacgatcaccctccgccaaaaactgcgcctagaacaggggctgaccaca
gcagtagctacgccaaaatccctcacatctgcccaaacccaagccttgtcccacatcaac
gcggccactcaagcccagacttttttgctacatggagtgaccggatcgggcaaaaccgaa
gtttatattcaagctattcggcctcgccttgccgagggtcaatctgccctagttttagtc
cccgaaattggtttaacgccgcaaatgctggatcggtttcaggccatctttggcgaacag
gttttggtttatcacagtgcattaagcgagggagaacgttatgacacttggcggcaacta
ttactggaaaaaccccgcctcgtcattggcacccgttcagcaatttttctccccctgcac
agcctcggcatcttggtcttagatgaagaacatgacagtggttataagcaagagcaacct
tccccctgctaccatgcccgcaccctggcccaatggcgctcggagttagaaaattgtccg
ttgattttaggaagtgctaccccaggcctggccacctggcagcaaaaactagaggataaa
ctgacctatctccccctcccccagcgcatccaggcccgcccattacccccgattgaaatt
gttgatcttcggaatgaactccaccagggcaatcgctccatgtttagccgaaccttattt
tctgctttggaaaatctacccgcctctggtcaagccctgctctttatccatcgtcgcggt
cacagcacctttgtctcttgccggagttgtggccaggccttggaatgtccccattgcagc
gtttccctgacctaccattggcccgatccccaacaagcccccgtgcttcgctgccattac
tgtaacttcagccgccctcagcctaaacaatgtccgagctgccagtcaccctaccttaag
ccctttggagggggcacccagcgagctgtccaagaacttaaggaacgactgcccgacctg
aaggtgattcgttttgacagtgatactacccaacgtaaaggggcccaccgccagttactg
gaggctttcacccgtcaagaagcccaagtcatgattggcacacaaatgttaaccaagggt
atggatatcgagaatgtcaatttagtcggcatcctcaccgccgatgggttactgcatttt
gccgattttcaggcaggggagcgcacctttcaaaccctaacccaagttgctggaagggct
gggcgcggggataaaccaggccgggttattctccaaacctacacccctgaacatcaagtg
attcaggctgttcaagcctatgcctatgaggattttgctgcggacgaactccaacagcgc
caggccctcaactatcctccctatggacaattggtcttaattcgcctcagtagtcctgat
cccgaggctgttgcccagaccgcccagactgtcagcacctcttgccagcaactcactggt
ttgaatagtgctgaagtggacattctcggccccgcccctgcccccatcctaaaagtagct
caacgctatcgctggcaaattctcctcaagtttaatcgccgccaatccgggcaatgtcca
ccccttcctttggatgtcaacgcactccgccagctctgtccaggcaatgtccggttaggt
ttggatgttgatccccaaaactttttctaa
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