Synechococcus sp. PCC 6312: Syn6312_2504
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Entry
Syn6312_2504 CDS
T02370
Name
(GenBank) PBS lyase HEAT-like repeat protein
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne00196
Photosynthesis - antenna proteins
syne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Syn6312_2504
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syne00194
]
Syn6312_2504
Enzymes [BR:
syne01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
Syn6312_2504
Photosynthesis proteins [BR:
syne00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
Syn6312_2504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
Cnd1
Motif
Other DBs
NCBI-ProteinID:
AFY61604
UniProt:
K9RWD9
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All DBs
Position
complement(2455968..2456645)
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AA seq
225 aa
AA seq
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MATATSLLSLIQAVEQAETPAGLIQSVEALAATGSLEAISPLMAVLGYNNPGAALVAMNG
LVRLGHAAVQPLLTGLDGYNYGARAYAIRALAMIAHPDALEILLQAALSDFAPSVRRAAT
KGLGGLDWRLVADAQVLSTQARVVAALEQLVLESDWALRYAVVVAATHLLPQVRDESLGE
RLLTLLQTLAQCDSDVAVRARIQLFARSSPLGECDPMLPAFSAAP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaacatccctcctctccctaatccaagcggttgaacaagcggaaacccca
gcaggcttaatccaatctgtggaagctttggctgcaaccggctctctggaagcgatttcc
ccactaatggcagtcctaggctataacaatcctggggcagccctcgtggcgatgaatggc
ttagtgcggttgggtcatgccgcagttcagcccctactcactggcctggatggctacaac
tatggggcgcgggcctatgcgattcgggccttggcgatgattgcccatcccgatgccttg
gagattctcctgcaagccgccctcagtgattttgcaccgagtgttcggcgagctgcaacg
aaggggttaggaggcttagattggcgcttagttgctgatgcccaagttctatctacccag
gcccgagtagttgcggctttggaacaactggttctagagagtgattgggcattgcgctat
gcggttgttgtcgcggcgactcatctgttaccccaagttagggatgagtctttgggagag
cggcttttaactttgctgcaaaccttagcccagtgtgattcggatgtagcagtacgggcc
cggatacagctatttgcccgttcttctcccctcggagagtgtgacccaatgttgcctgct
ttcagtgctgccccttaa
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