Synechococcus sp. PCC 6312: Syn6312_2559
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Entry
Syn6312_2559 CDS
T02370
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syne
Synechococcus sp. PCC 6312
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syne03016
]
Syn6312_2559
Enzymes [BR:
syne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Syn6312_2559
Transfer RNA biogenesis [BR:
syne03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Syn6312_2559
Prokaryotic type
Syn6312_2559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
HTH_Tnp_4
Lactamase_B_4
Sigma70_r4
VHP
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
AFY61658
UniProt:
K9RW07
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All DBs
Position
2509408..2510769
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AA seq
453 aa
AA seq
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MEITFLGTSSGVPTRSRNVSSVALRLTQRGEIWLFDCGEGTQHQLLRSNLRSSQIRRIFV
THMHGDHIFGLMGLLASCGMAGTVSEIDLYGPPGLDRYIENCQKWSQMHLHYTLRVHTVS
PGRVYEDADYSVTCGPLHHRVTAYGYRIQETDRPGRFDVEKAKALGIPFGPVYGQLKQGK
TVKLGDGRTFDGRDFCDPPELGRSLAYCTDTIYCDAAVQLAYQADVLIHESTFAHQDIDM
AEQRLHSTSTMAAQVAATAQVKLLFLTHFSPRYAPGNALRVEDLLAEAQAIFPNSQLARD
FLTYELPRHRTIAPSPEATPAPVGEPVPVSPRQSHRYESLKHLSPTEFKNLVGVTLETFR
ALVKLIPLKMAPRSSQPKATLSPENQVLMALHYWRNHLTYREVASSWDLGESAVSKLIRE
VKTHMTNSNQFRVITQAETKANPGLVIMALQSE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattacctttttaggcaccagttcgggagttccaacgcgctcgcgcaatgtttcg
agtgtggcattgcgactaacccaacggggagaaatttggttatttgactgtggggaaggg
actcaacaccagttgcttcgcagcaatttacgcagcagccaaattcgccgtatttttgtg
acccacatgcacggggatcatatttttggcctgatgggattgttagccagttgcgggatg
gcggggacagtgagtgaaattgacctctatggaccgccggggttggatcgctatatagaa
aattgccaaaaatggtcgcaaatgcatctgcactataccttacgggtgcatacggtttcc
ccaggccgggtctatgaagacgcagattattctgtcacctgtgggccgttgcatcatcgc
gtcaccgcctatggctatcgaattcaagaaacggatcggccggggcggtttgatgtggaa
aaagcaaaagctttggggattccctttgggccggtctatggacaactgaaacagggaaaa
acggtcaagcttggggatggccgcacctttgacggtcgagatttttgtgatccgccagag
ttgggccgctccctcgcctattgcaccgacacaatctattgtgatgcagcggttcagtta
gcctaccaggccgatgttttaatccatgaatctacctttgcccaccaagacatagatatg
gctgaacaacggctccactccacttcgacaatggcggcccaagttgcagccacggcccaa
gttaagctcttgtttctgacccactttagcccccgctatgcccctgggaatgccctccga
gttgaagatctcttagctgaagcccaggccatttttcccaatagccaactggcccgcgat
tttctcacctatgaattgccccgtcaccggactattgccccatctccagaagccaccccc
gcgccagtcggagaacccgtccctgttagcccgcgccaatcccatcggtatgagtctctc
aaacatctttcgccaaccgaatttaagaacttagttggagttaccctcgaaacctttagg
gcattggtaaagctgattcccctgaaaatggcccctcggtcttcccaacccaaagctaca
ctgtccccggaaaatcaagtcctgatggccttgcattattggcgcaatcatttaacttat
cgagaggttgctagttcatgggatttgggagagtcagccgtatccaaattgatccgagag
gtgaaaacgcacatgactaactccaaccagttccgagttatcacccaggccgagacgaaa
gcaaacccaggcctggtcatcatggcccttcagtctgaataa
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