Synechococcus sp. PCC 6312: Syn6312_2684
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Entry
Syn6312_2684 CDS
T02370
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Syn6312_2684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_2684
Enzymes [BR:
syne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Syn6312_2684
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Syn6312_2684
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Syn6312_2684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AFY61772
UniProt:
K9RXH8
LinkDB
All DBs
Position
complement(2641874..2642716)
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AA seq
280 aa
AA seq
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MPELPEVETVRRGLAELTLDVPILGGEVLYPKTVAYPLDPDEFISGLVGQSLQAWERRGK
YLIGKLNSRGWLVVHLRMTGQLFWLSQEIPMAKHTRVRLFFGSGQELRFVDQRTFGQMWW
LPAADLLPQLMPTLAGLGPEPLGPDFTVSYLAQKLQHPHKPIKNALLDQALIAGIGNIYA
DEALFLAQIHPQARCCDLTPVQIQTLHQKIKAVLQLSLAVGGTTFNTFTSVEGINGNYGG
QAWVYGRKGQPCRVCQTPIQQIRLGGRSAHFCPQCQPLTN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaactgcctgaagttgaaacggtacgtcgtggtttagccgaattgacccttgat
gttcccattttagggggagaagttctctatccaaaaacagtcgcctatcctcttgatcct
gatgaatttatttcaggattagttgggcaatccctccaggcctgggagcggcgaggaaaa
tatctgattggcaaactcaattcaaggggctggttggttgtccatttacggatgacgggc
cagcttttttggttgtcccaagaaattccgatggccaaacatacccgtgttaggctcttt
tttgggtcggggcaggaacttcgctttgtggatcaacgcacctttgggcaaatgtggtgg
ctaccggcagcagatttattacctcaactaatgccaaccctagcgggcctggggccagaa
cccttgggaccagatttcacagtttcgtatttagctcaaaaactccaacatccccacaag
ccaattaaaaacgccctccttgaccaggccttgattgcggggattggcaatatctacgcc
gatgaagccctatttttggctcagatacatccccaggcccgctgttgtgatctcacccct
gtccaaatccaaaccctccaccaaaaaatcaaagccgttttgcaattaagcctggcggtt
gggggaacgacttttaatacctttacaagcgtagaaggaattaatgggaactatgggggc
caggcctgggtttatggacgcaaagggcaaccctgtcgagtctgccaaactccgattcaa
caaatacgcttagggggtcgctcggcccatttttgcccccaatgtcagccgctaacaaat
tga
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