Synechococcus sp. PCC 6312: Syn6312_3142
Help
Entry
Syn6312_3142 CDS
T02370
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syn6312_3142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syne03019
]
Syn6312_3142
03016 Transfer RNA biogenesis [BR:
syne03016
]
Syn6312_3142
Enzymes [BR:
syne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Syn6312_3142
Messenger RNA biogenesis [BR:
syne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Syn6312_3142
Transfer RNA biogenesis [BR:
syne03016
]
Prokaryotic type
tRNA degradation factors
Syn6312_3142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_N4BP1_2nd
KH_KhpA-B
KH_SLS1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AFY62191
UniProt:
K9RXC8
LinkDB
All DBs
Position
complement(3076119..3078263)
Genome browser
AA seq
714 aa
AA seq
DB search
MTKLEKVIPLDGRDLHLTIGCFAPQADGAVLVRSGNTAVLVTATQAGTRDGIDFLPLTVD
YEERLYAAGRIPGGFLRREGRPPEKAILTGRLIDRPMRPLFPSWLRTDIQIVATTVSMDE
QVPPDVLAVTGASIAVLLGQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLVVAGT
DAGVVMVEAGANQLPEQDVIEAIDFGYEVVRDLIQAQRDLLAELGIPLIEVAAPTLDPTL
QDFIYQKAAGPIQEVLQRFEPKTIRDAALDEVQAAIGQDINALDETDPVYTAATASPKAL
PTLFKSVTKKLMRQQIIEKGVRVDGRKLDEVRPISCDVGVLPTRVHGTGLFNRGLTQVMS
VVTLGTPGDAQEMDDLHPDEEKRYLHHYNFPPYSVGEARPMRSPGRREIGHGALAERALI
PVLPPQQEFPYVIRVVSEVLSSDGSTSMGSVCGSTLALMDAGVPILKPVSGAAMGLIKEG
EEVRILTDIQGIEDFLGDMDFKVAGTETGITALQMDMKITGLPLDVITQAIQQARPARLH
ILEKMLACLPTSRSHLSPFAPRLISFKIEPELIGLVIGPGGKMIKSITEETGAKVDIQDD
GTVTVSAIDEDKAKRARSIIQGLTRKINTGDVFLGKVTRVIPIGAFVEFLPNKEGMIHIS
QLAEYRVGKVEDEVNVGDEVIVKIREIDPRGRVNLTRLGIHPDEAVAARTVVAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaactggaaaaagtgatccccctagatgggcgggatctgcatttgacaattggc
tgttttgcaccccaggccgatggtgctgtcttagttcgttccgggaataccgctgtctta
gtcaccgcaacccaggccggaacacgagatggcattgatttcttacccttaacggtcgat
tacgaagaacgcctctatgcagccggtcggattccgggaggttttttacggcgagaaggc
cggcctccggaaaaggctattttgacaggtcggttaattgatcgccccatgcggccccta
tttcccagttggctccggacggatattcaaattgttgccaccacggtttcgatggatgaa
caggttccccccgatgttttggctgtaacaggagcttccattgctgttcttttagggcaa
attccctttaatgggccgatggcggcggtgcgggttggcctggtcggcgatgactttatt
attaatccgacttacgccgaaattgaagcgggtgatctggacttagtcgtggctggcacc
gatgcgggtgtggtcatggtggaagctggagcgaatcaactgccggaacaagatgtcatc
gaagccattgactttggctatgaagtggttcgcgacctcatccaggcccagcgagattta
ttggccgagctaggaattcccctgattgaagtggcagccccaaccctcgaccccaccctg
caagatttcatctaccaaaaagccgcaggccccattcaagaagttctccaacgctttgaa
cccaaaacaatccgggatgctgccctcgatgaagtccaggccgcgattggacaagatatt
aacgccctcgatgaaaccgatccagtctataccgctgctactgcctcacccaaagccctg
cccaccctgtttaagagtgtcaccaaaaaactgatgcgccaacagattatcgaaaaaggc
gtgcgggttgatggtcgcaaactggatgaagttcgcccgattagttgtgatgtcggggtt
ttgccgactcgggttcatggcaccggcctgtttaatcggggtctgactcaagtcatgtcg
gtggtgaccttggggactcccggtgatgcccaggaaatggacgatctccaccctgatgaa
gaaaaacggtatctccaccactacaattttccgccctactcagtcggtgaagctcgccca
atgcgctctccaggccggcgggagattgggcacggagccttggcggagcgggccttaatt
cctgttttacccccccaacaagaatttccctatgtaatccgggtggtctcagaagtgctt
tcgtctgatggttcgacttcgatggggtctgtctgtggttcaaccttagccttgatggat
gcaggcgttcccattctcaaacccgtcagtggcgcggcgatgggactgattaaagaaggg
gaagaagtccgcattctcacggatattcagggaattgaagatttccttggggatatggac
ttcaaagtagctggaacggaaaccgggattacggccctgcaaatggacatgaaaattacg
ggtttacccctcgatgtgattacccaggccatccaacaagcccgcccagcccgtctccac
atcttggaaaaaatgctggcctgtttacctactagccgcagtcatctctctccttttgcc
ccgcgcctgatctccttcaaaattgaaccggagttgattggtctcgtcatcgggccgggc
ggaaagatgatcaaaagcatcaccgaggaaaccggagccaaggtggatattcaggatgat
ggcacggtcacggtttccgccattgatgaagacaaagccaaacgggcccgcagcatcatc
caaggcctaacccgcaaaatcaacacgggcgatgtcttcctcggcaaagtcactcgcgtc
attccgattggggcctttgttgaatttctgcccaataaagaagggatgattcatatttcc
caattggccgaataccgagttggcaaagtggaagatgaagtgaacgttggggatgaagtc
atcgtcaaaattcgcgaaattgatccacgcggtcgggttaacctaacgcgcttaggcatc
catcccgatgaagcggtggcggcccgaacagtggttgctgaataa
DBGET
integrated database retrieval system
