Synechococcus sp. PCC 6312: Syn6312_3157
Help
Entry
Syn6312_3157 CDS
T02370
Name
(GenBank) transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
Organism
syne
Synechococcus sp. PCC 6312
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Fer4_5
cNMP_binding
Fer4
Fer4_2
Fer4_10
Fer4_21
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
AFY62204
UniProt:
K9RY39
LinkDB
All DBs
Position
3091912..3094440
Genome browser
AA seq
842 aa
AA seq
DB search
MTPDTALAWLQSQPLFAALSNSLQETIATHLELVFLGADQRLTPPNTRPLGLFLLITGEL
ESQTGTGLGQTEILFPGAVLFWAELLLQQPITNPITALTDAELWLLPQEKLTELINQHPE
LSQALSQQLAAAVTTLTNQLSLEQERQHILRPYIVPQAKRGIIGKSRYAVQLRQQLKTAA
QGQENVLIFGEPGLEKDNMAALIHFGSRQRRQPLIKIACDKLQLSGAELFGRSGGKPGLL
AWVGTGTIILNNIQDLPPPLWPAILNLLKTNTYQPVGSTESSPEIALSRNQARIILIAEK
ADTRLEKVISTTIKVPPLRVRKADIEAHVDYYISLICRARCCQRVSLTPEALRRLQSYDF
PGNLRELAGLVERAINQRGIEGELTEEVFWAAEGKKRRFRVNLLNAYPWLRSFLRSPAWP
NWINYGITTWVFAAVVAILFWGPQTRNQNFALNLFWCWWWPLILIGFPFVGRLWCAVCPF
MIYGELTQKLSLWLFPRTLQKWPRQTAEKYGAWFLFGLFALIFLWEELWDLPNTAALSSW
LLLLITGGAVIGSLRFERRFWCRYLCPIGGMNGLFAKLSMTELRAQQGTCGAECTTYQCY
KGGPALGEGLETNGCPLYSHPAQLVDNRDCVLCMTCLQACPHRSVALNLRPPGIELWTTH
TPRHAEIALLLLLLGGIFLHHLPDLERLSGFNWHLEQFWFHGLASVVVLLIAALIPLLAY
GITWLLAPKLKPRSWLELAYGYLPLVWAGNLAHYLPWGLGEGGKLLPVTAATMGFNSYNL
PILVAHPAVIAFLQGVTLLFGLGVSLWLSQKIARQSWNLLWPHQLGIGLIAGACWWVLLG
TT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgatactgctttggcttggctccaatcacaaccactgtttgctgccctcagt
aattccttgcaagaaaccattgcgactcacttagaattagtttttctgggtgctgatcaa
cgccttactcctcccaacaccaggccactgggattatttttgttaattacgggtgagtta
gaaagtcaaaccgggacaggcctgggacaaactgaaatcctctttccgggcgcagtttta
ttttgggccgaacttctcctccagcaaccgattaccaacccaattaccgccctaaccgat
gctgaactctggttattaccacaggaaaaactaaccgaactgattaaccagcacccggaa
ctgtcccaggccctctcccagcaactagccgcagcggtgacaactctcaccaatcaactc
agcctagagcaggaacgccaacacattctccgcccctacattgttccccaggccaagcgc
gggattattggcaaaagtcggtatgcagtccaactccggcaacagcttaaaaccgcagcc
caaggccaggagaatgtgctgatttttggcgaaccgggcctggaaaaagataacatggcg
gcactgatccacttcggctcccggcaacggcgacaacccctcatcaaaattgcctgtgac
aaactgcaactgagtggagcagaactttttggccgatctgggggaaaaccaggactcttg
gcctgggtgggaacgggaaccatcatcctcaacaatattcaagatttacctccgccccta
tggccagcgattctcaatctcttaaaaacgaatacctatcaaccagttgggtcaacggag
tctagccctgaaattgccttgagtcgcaaccaggcccggattattttaattgccgaaaaa
gcagatactcgtttggaaaaggtcatctccaccacgattaaagtacctcccttacgcgtc
cgcaaggccgatattgaagcccatgtggactattacatcagcctgatttgtcgggcccgc
tgttgccaaagagtttccctcaccccagaagccctccgccgcttacaaagctatgacttt
cccggaaatttaagagaactggccggcctggtggagcgagccatcaaccaacgcggcatt
gaaggggagttaaccgaggaagtattctgggccgctgagggaaaaaaacgccgctttcga
gtcaatttactcaatgcctatccctggttacggagtttcctgaggagtcccgcatggccc
aactggatcaactatgggatcacaacctgggtgtttgcggccgtggtagccattctcttt
tggggaccgcaaactcggaatcaaaattttgctctgaatttgttttggtgttggtggtgg
ccattgatcctgattggctttccctttgttgggcggctgtggtgcgctgtttgtccattc
atgatttatggcgaactgacccaaaaactctctctctggctctttccccgcaccttacaa
aaatggccaagacaaaccgccgaaaaatatggggcttggtttttatttggcctgtttgcc
ctcatttttttatgggaagaactctgggatctaccgaatacggccgctctgtccagttgg
cttttactcctaattacgggcggggctgtgattggctccttgcgctttgaacggcgattt
tggtgtcgctatctctgcccgattggggggatgaatggcctatttgccaagctttctatg
acggaactccgggcccagcaggggacttgtggcgcagaatgtacaacctaccaatgctat
aaaggcggccctgctctgggggaagggttagaaacgaatggctgtcccctctattcccat
ccagcccaattagtagataaccgcgattgtgttttatgtatgacttgtctccaggcctgt
ccccatcggtctgtagccttaaatttgcgcccccccggcattgaactctggacaactcat
acgccccgccatgccgaaattgccctgttattgttgctgttgggcggtatttttctccat
catttaccggatttagaacggttgagtggctttaactggcatttggagcaattctggttt
catggcctggcttctgtggttgttttactgattgcggccctgattcccctcctcgcctat
ggcatcacttggcttttggctccaaaactaaaaccccggtcttggttggagttggcctat
ggctatttacctttggtctgggccggaaatttagcccattacctaccttggggcctggga
gaaggcggcaaacttttacctgtgacagccgcaacgatgggtttcaatagctacaatttg
ccgatcctcgtcgcgcatccagcggtgattgcctttttacaaggggtaacgcttctgttt
ggcctgggggtgagtctctggttgagtcaaaaaattgcccgtcaatcctggaaccttctt
tggccccatcagttgggcattggcctgattgccggggcctgttggtgggtactcttaggc
acgacttga
DBGET
integrated database retrieval system
