Synechococcus sp. PCC 6312: Syn6312_3571
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Entry
Syn6312_3571 CDS
T02370
Name
(GenBank) PAS domain S-box
Organism
syne
Synechococcus sp. PCC 6312
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
HATPase_c
PAS_9
PAS
GAF_2
GAF_3
PAS_4
HisKA
PAS_8
PAS_3
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AFY62590
UniProt:
K9RX68
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All DBs
Position
3494326..3497070
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AA seq
914 aa
AA seq
DB search
MQAKVLPHITQSLTCLWSSQAWPEPLDIALDNLGTALDVDRVRLWQVQQTSGYSHNWLSL
LAAWPKSPLEASALALVSPLASFSHWLSRLQAGHSLQARVGELSTAEQQWFQELGIASVL
VMPVNIGAGLGAILTLEYTQQEYYWPEETVNLLYHFTQPLGVALHYHQTKQLSYAPPAQP
YDQRLVQLAQRKPLHHGNLELALQDISRTAAQTLEVERTGIWFYSTQRQQVRCIILYQSS
QDQFSQGLELAAADYPDYFAALQEQRTIAAHQAELDPRTHEFAPHYLRPLGITSMLDAPI
WVEGEMIGVVCHEHIGPPRQWTIGEQQFAAAIADLVSLAIESRDRHQALADLQASEERLQ
CFFQATTEAVVFHEHGRIVDLNQAAERMFGYSSQELIGTSVLDLADASSRELIRQRLQEP
SDQLIEAVGRKKTGETFIGELQGRAIRYQGRAMRVVSLRDITQRKQAEIELRLADQREKL
LGEIALRIRQSLELEDILSTTVLEVRQSLHVDRVFIAYLDGTAQQAQTVAAAISTEWQAG
IEAIFQDPDYLQTLFSLGDCPQAWTCQTDHEPTAPVLARYHIQSTLAVPIPQTVNVRYPT
QHLPPKVVLVLHQCAGPRDWKIFEWQLLEQLATQVAIALQQASLYQQLAALNANLEYQVQ
ERTQQLEQKMLELAELNRLKDVFLHAVSHDLRTPVMGTLMVLNHLLPADETTAPVTVPRH
IWSRMISSHNRQLTLIDSLLDIHTSEDNGLSLQQIPQALDQLIENTLADLVLLLDKNQTH
LDNAVPTDLPLIWIDPGQLQRVFENLITNALKHNPPGLKLSLRARVVESEATSSQPMVLC
TVQDNGLGIHPEQQEHLFDLYYQGKQSRHLRGIGLGLYLCRQIVQAHGGEIGVISTPDQG
ATFWLTLPIYQAAN
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaaggttttgccccacattacccagtccctcacttgtttatggtcatcccag
gcctggcctgaacccctcgatattgccttagataacctaggaactgccttggatgtggat
cgagtccgcctttggcaagtccagcaaacctctggatattcccataattggctctcttta
cttgcagcctggcccaaatctcccctagaagcatctgccttagccttggtcagcccttta
gccagttttagtcattggttaagtcgtttgcaggccggtcacagtctccaggccagggtc
ggggaactttcaaccgccgagcagcagtggtttcaggaattgggaattgcttcagttcta
gtcatgccagtcaacataggtgcgggcctgggggccattttgaccttagagtacacccag
caggaatattattggcctgaagaaacagttaacctcctctatcacttcacccaaccccta
ggagtcgccctgcattatcaccagaccaagcaactgagttatgccccccccgcccaaccc
tatgatcaacgtctcgttcaactggcccagcgtaagcccctccaccacgggaacttagaa
ttagccctccaggatatttctcgcaccgctgcccaaacccttgaggtggagcgtaccggt
atttggttttacagcacccaacggcaacaagtccgctgcatcattttgtaccaatccagt
caagaccagtttagtcagggcttggaactggcagcagcagattatcccgactatttcgcc
gcactccaagaacagcgcaccatcgccgcccaccaggccgagttagacccacgcacccac
gaatttgccccccattacttacgccccctcgggattacctctatgctagatgcccccatt
tgggttgagggggagatgattggggtcgtctgtcatgaacatattggccccccgcggcag
tggacgattggggaacagcagtttgccgcagccattgccgatttagtctccttagcgatt
gaatcccgcgaccgtcaccaggcccttgcggatctccaagccagcgaagaacggctccaa
tgctttttccaggccacgaccgaagcggtagtgtttcacgaacatgggcgaattgtcgat
cttaaccaggccgcagagcggatgtttggctattcgtcccaggaattgattggcacctct
gttttagatttggctgatgcaagttcccgagagttgattcgtcagcgtttacaagaaccc
tcggatcaactgattgaggcagtcgggcgcaagaaaacgggtgagacctttattggggaa
ctccaaggacgggcaatccggtatcaagggcgggcaatgcgagtagtgagtttacgggat
attacccaacgtaagcaggcagaaatagagttacggctggcggatcaacgggaaaaacta
ttaggggaaattgccctccggattcgccaatctcttgaactagaggatattctcagcacc
accgttttagaggttcgacaaagcctccatgtggatcgggtcttcattgcctatctggat
ggaactgcccaacaggcccaaaccgtagccgcagcaatttccaccgaatggcaggcggga
attgaggcgattttccaagacccagattatttacagaccctattttccttgggtgattgt
ccccaggcctggacttgtcagactgaccatgaaccaaccgcccctgttttggcccgctat
cacatccaatccaccctggccgtccccattcctcaaactgttaatgtgcgctatcccacc
cagcatttgccccccaaagttgtcctcgtgctgcatcaatgcgccgggccacgggattgg
aaaatctttgaatggcaactccttgaacaattggccacccaagttgcgattgccttacag
caggccagtctttatcaacaattagctgccctcaacgccaatttggaatatcaagtccaa
gaacgcacccagcaactggaacaaaaaatgctggaactcgcagaactcaatcgtctcaag
gatgtctttctccatgccgtctcccatgatttacgcaccccagtcatgggaaccctgatg
gttttgaatcacttgctccccgccgatgaaacaacagccccggtcactgtcccccggcat
atttggagccgcatgattagcagtcacaatcgtcaactcaccctgattgattcccttttg
gatattcataccagcgaagataacggactgtctctacaacaaataccccaggccctggat
cagttaattgagaacaccttggctgatttagtcttacttctcgataaaaatcaaacccac
ttggataatgccgttcccactgatttacccttgatttggattgatccgggacaactgcaa
cgagtctttgaaaacttaatcaccaatgccctcaaacataatccccccggcctaaaactg
tctctgcgggctcgggttgttgaatctgaagcgacttccagtcagccgatggttttatgt
accgtccaagataatggcctgggaattcacccggaacaacaagagcatctttttgatttg
tactatcaaggcaagcaatctcgacatttacggggcattggcctgggactctatctctgt
cggcaaattgtccaggcccacgggggcgagattggcgtgatcagtacaccggatcagggg
gcgacattctggttaaccttacccatttatcaagctgcgaattga
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