Synechococcus sp. PCC 6312: Syn6312_3629
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Entry
Syn6312_3629 CDS
T02370
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne03030
DNA replication
syne03430
Mismatch repair
syne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Syn6312_3629
03430 Mismatch repair
Syn6312_3629
03440 Homologous recombination
Syn6312_3629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syne03032
]
Syn6312_3629
03400 DNA repair and recombination proteins [BR:
syne03400
]
Syn6312_3629
Enzymes [BR:
syne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Syn6312_3629
DNA replication proteins [BR:
syne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Syn6312_3629
DNA repair and recombination proteins [BR:
syne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Syn6312_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DnaA_N-like_STI
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
AAA_19
AAA_16
AAA_5
Rad17
AAA_18
AAA_11
BRCA2
PIF1
DNA_pol3_delta_C
DUF815
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AFY62645
UniProt:
K9RXC6
LinkDB
All DBs
Position
complement(3554506..3556410)
Genome browser
AA seq
634 aa
AA seq
DB search
MNYEPLHHKYRPQTFADLVGQAAITTTLTNALQQERIAPAYLFCGPRGTGKTSSARILAK
SLNCLTAPKPTPSPCGVCDVCQAIAHSSALDVIEIDAASNTGVDNIRELIEKAQFAPVQC
RYKVYVVDECHMLSTSAFNALLKTLEEPPDRVIFVLATTDPQRVLPTIISRCQRFDFRRI
PLADMVSHLTHIAELETININPEAVNLVAQIAQGGLRDAESLLDQLSLLDGEITIERVWD
LAGSVPEQDLFQLLQAVKSQHPETLLEQTRHLLERGREPLIVLQNLTGFYRDFLIAKTAP
HRQDLVAITPDTWAALCEFAQNWSSQDILVGQQHLRACELQVKNTTQPRLWLEVGLLGLL
SLSKTDQSSPPPANSPRPQAQSPTIPPAVISHPPSQPVANAILPTATPPRPAVPENLPTQ
APPPSPAKSSPPDPTPQPPDPTDLNLSHLWQQGIQLVQFPGTQALLSQHGQLLSCSDREI
RIGLPSPGLLKLTQKYQDKIEIAFQTALGKPVKVRLEIATSPAADTSQSTPAVQPRPTPP
PPNPTLNPRQPPAHPPENPPPSPAPEFQLAPPAPPDALSQATQSFARFFAGEIVSPEPGS
PPVVLEPESLSPDSLTPATDEAELPPELEEDLPF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaattacgagccgctgcaccataaatatcgcccccaaacctttgcggatctggtggga
caagcggctattacgacaactttgaccaatgcacttcaacaggaacgaattgccccagcc
tatctgttttgcgggccgcggggaacgggaaaaacctccagtgcaaggattttagcaaaa
tctctcaactgtttaactgcgccgaaaccaaccccaagtccctgcggtgtttgtgatgtt
tgccaggccattgcccacagttctgccctagatgtaattgaaattgatgcggccagtaat
accggggttgataatattcgagaattaattgaaaaagcccaatttgctccagttcaatgt
cgctataaagtttacgttgtggacgagtgtcatatgctcagtacctcagcgtttaatgcc
ctcttaaagactcttgaagaacctccagatcgggttatttttgttctcgcaaccaccgat
ccccaacgggttttacccacgattatttctcgttgtcaacgttttgattttcgccgcatc
cccctggccgatatggtctcccatttaacccatattgccgaactagaaactatcaatatc
aatccagaagccgttaacctagtcgcccaaattgcccaaggtggcttacgggatgcggaa
agtttactcgatcaactcagcttattagatggagaaattacgattgaacgggtttgggat
ttagccggttcggtccctgaacaagatttatttcaactcctccaggccgtcaagagtcaa
catcccgaaacgttacttgagcaaaccagacacttattagaacgcgggcgtgaaccctta
attgttttacagaacctgaccggattctatcgagattttctgattgctaaaacggctccc
caccgccaggatttagtggccattaccccggacacttgggccgccctctgtgaatttgcc
caaaactggtcgagtcaggacatcttagtgggacaacaacatctgcgggcctgtgaacta
caagtcaaaaacacaactcagccgcgcctgtggttagaagtggggcttttaggtttgctg
tctctctccaaaacagatcaaagttctccacccccagccaatagtcccagaccccaggct
caatcgcccacgattcccccggcagttatttcccaccccccaagccagcccgttgccaat
gccattcttcccactgcaacaccgcctcgcccagccgttcccgaaaatctaccaacccag
gccccgccaccatctccggcgaaatcttctcccccagaccctaccccacagccccccgat
ccgactgacctcaacctttcccacctttggcaacaggggattcaactggttcaatttcca
ggcacccaggctttgctctcccaacatgggcaactcctcagttgtagtgatcgggagatt
cggattggcttgccatctcccggtctattgaagctgacccaaaagtatcaggacaaaatc
gaaattgcctttcaaacagccctcggcaaacccgtcaaagttcgcttagaaattgccact
agtccagcggcggatacatctcaatctactccagccgtccagccccggcccaccccacct
cctcccaaccccacccttaatccccgtcaaccacccgcccacccgccggaaaacccgccc
ccctcacccgccccagaattccaacttgcgccccccgccccacccgatgccctcagccag
gccacccaaagctttgctaggttttttgcgggcgaaattgtttcgcctgaacccggtagc
ccccccgtagtcttggagccggagtctctcagcccagatagtctcacgcccgccactgac
gaagcagaactccccccagaacttgaggaagatttacctttttaa
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