Synechococcus sp. PCC 6312: Syn6312_3630
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Entry
Syn6312_3630 CDS
T02370
Name
(GenBank) putative permease
KO
K11720
lipopolysaccharide export system permease protein
Organism
syne
Synechococcus sp. PCC 6312
Pathway
syne02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syne00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Syn6312_3630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syne02000
]
Syn6312_3630
Transporters [BR:
syne02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Syn6312_3630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AFY62646
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All DBs
Position
complement(3556476..3557639)
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AA seq
387 aa
AA seq
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MKILSPRQIWRRWLWPLGRIGPGSRLDWYLWRNIVPAFGLGITIFAALALSVGVLFDLVR
QVAEAQIPLTAVLQVLLFQIPYTLTFALPMAVMLAVLTTISRLGEDGELVAFKSIGLSLY
RLAAPILAFSLVISLITFTLGETVIPEFRARSDQVLQRYLRQEERVGQSRDIYYPEYGPN
DQVRRLYYAKEFDGVSMRGITVVDFSQPELVQVITAAEAAWSYPRSTWTIADGVIYLVSS
LGNIRDIIEFQQQQLVIPRKLEEDVLSPSQVTELSTAQARQALTLAQKDNNPILVRALNV
HLQQQYAQPFVAIVFGLMGLGFGAMGQKRGAAQGFGLSVGLIFGQILLTYFSGALGFVGI
LTPIMAAWLPQGLGLAVAIWLIQRANR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttgtcccctaggcaaatttggcggcgatggctctggccactgggtcggatt
gggcctggctcacggttggactggtatctctggcggaatattgtccccgcctttggcctg
gggatcacgatttttgccgccttagctctttcggtgggggtgctatttgacctagtgcga
caagtggccgaggctcaaattcccttgaccgcagttttacaagttctgctcttccaaatc
ccttacactctcacctttgctttgccaatggcggtgatgctggctgttttaacgacgatc
agtcgcttgggggaggatggggaactagtggccttcaagagtattggccttagtctctat
cgtcttgctgcaccgattttggccttttctctggtgattagcctcatcacgtttaccttg
ggtgaaaccgtcatccctgaatttcgggcccggtcggatcaggtgttacagcggtatctg
cgccaagaagagcgggttggccaaagtcgggacatttactatccagaatatggccccaat
gaccaagtgcggcgattgtactatgccaaggaatttgatggggtctcaatgcgggggatt
acagtggtagatttttcccaaccggagttagtacaggtgattacggcggctgaggcggcc
tggagttatccccgcagtacttggacaattgctgatggagttatttacctagtctcgagc
ttggggaatattcgcgacattattgagtttcaacagcagcagttagtcattccccgcaag
ttagaagaagatgtcctcagcccttctcaagtgaccgaactttcgacggctcaggcccgc
caggctctcactcttgcccagaaagataataaccccatcctcgtgcgcgccttaaatgtc
catcttcagcaacagtatgcccagccctttgtcgcgattgtctttggtttgatgggccta
gggtttggggcgatggggcaaaagcggggggcggcgcaggggtttggcttaagtgtgggc
ttgattttcgggcagattctattgacctatttttccggtgctttagggtttgtcggcatc
ctcacaccgattatggccgcgtggctaccccaaggcctaggcctggctgtggccatctgg
ctcattcaacgggctaatcgctaa
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