Synechocystis sp. PCC 7338: HTZ78_03180
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Entry
HTZ78_03180 CDS
T10297
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
synh Synechocystis sp. PCC 7338
Pathway
synh03018
RNA degradation
Brite
Enzymes [BR:
synh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HTZ78_03180
Messenger RNA biogenesis [BR:
synh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HTZ78_03180
Ribosome biogenesis [BR:
synh03009
]
Prokaryotic type
rRNA helicases
HTZ78_03180
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Gene cluster
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NCBI-ProteinID:
QUS62280
LinkDB
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Position
complement(669230..670693)
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AA seq
487 aa
AA seq
DB search
MTSTFADLGLSEKRCQLLADIGFESPTPIQTEAIPLLLSGRDMLAQSQTGTGKTAAFALP
LMDRIDPEGDLQALILTPTRELAQQVAEAMKDFSHERRLFILNVYGGQSIERQIRSLERG
VQIVVGTPGRVIDLIERKKLKLETIQWVVLDEADEMLSMGFIDDVKTILRKTPPTRQTAC
FSATMPREIKELVNQFLNDPALVTVKQTQSTPTRIEQQLYHVPRGWSKAKALQPILEMED
PESAIIFVRTKQTAADLTSRLQEAGHSVDEYHGNLSQSQRERLVHRFRDGKIKLVVATDI
AARGLDVNNLSHVVNFDLPDNAETYIHRIGRTGRAGKTGKAIALVEPIDRRLLRSIENRL
KQQIEVCTIPNRSQVEAKRIEKLQEQLKEALAGERMASFLPLVRELSDEYDAQAIAAAAL
QMIYDQSCPHWMKTDWEVPEVDFNKPVLRRNRGGGGGQNKGGGYQGKPGKPRRSSGGRRP
AYSDRQQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgactagtactttcgccgaccttggtctttctgaaaaacgttgtcaactcttggccgac
attggctttgagtctcccaccccaattcaaaccgaagccattcccctcctgctcagcggc
cgggatatgttggcccagtcccaaacgggtactggtaaaaccgccgcctttgcactgcct
ttgatggatcgcattgatcctgagggagatttgcaagccttgattttgacccccacccgg
gagttggcccaacaggtggcggaagcaatgaaggacttttcccacgaacgccgtctgttt
attttgaatgtgtatggtggccaatccatcgagcggcaaattcgcagcctagaacgcggt
gtacagattgtggtaggtaccccagggcgcgttattgatttaattgagcgcaaaaaactg
aaattggaaaccatccaatgggtagtgctagatgaagcggacgaaatgctgagcatgggc
ttcattgacgatgtgaaaactatcctgcgtaaaactccccccaccaggcaaaccgcttgt
ttctctgccaccatgccccgggaaattaaagaattggtcaaccaatttttgaacgatccc
gccctagtgaccgtcaaacagacccaatccacccccacccgcattgagcaacagctttac
cacgtgccccggggttggtctaaggccaaagcgttgcaaccgattttggaaatggaagat
cccgaatccgccatcatctttgtacgcaccaaacaaaccgccgctgaccttaccagtcgt
ttgcaagaagcgggccatagcgtggatgagtaccatggcaacctgagccagtcccaacgg
gagcgcttggtgcatcgttttcgggatggcaaaattaagctggtggtggccacggacatc
gccgcccggggtttggatgtgaataatctcagccatgtggtcaattttgatttacccgat
aacgctgaaacctatattcaccgcattggccgcaccggtcgggctggtaaaaccggcaag
gcgatcgccctggtggaacccattgaccgtcgtttactgcgctccatcgaaaatcgtctc
aaacaacagatcgaagtttgtacgatccccaaccgctcccaggtggaagccaaacgaatc
gaaaaactccaagaacaactcaaagaagccctagccggtgaacggatggcctcattcctc
cccctagtacgagaattgagtgatgagtatgatgcccaggcgatcgccgctgcggccctg
cagatgatctatgaccagagttgtccccattggatgaaaaccgattgggaagtgcctgaa
gtcgacttcaacaaacctgtcctgcgtcgtaaccgtggtggtggcggtggtcaaaataaa
ggtgggggctaccaaggtaaaccgggtaaaccccgtcgctccagtggtggccgtcgccct
gcctacagcgatcgccaacagtaa
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