Synechocystis sp. PCC 7338: HTZ78_03720
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Entry
HTZ78_03720 CDS
T10297
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
synh Synechocystis sp. PCC 7338
Pathway
synh03030
DNA replication
synh03430
Mismatch repair
synh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HTZ78_03720
03430 Mismatch repair
HTZ78_03720
03440 Homologous recombination
HTZ78_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synh03032
]
HTZ78_03720
03400 DNA repair and recombination proteins [BR:
synh03400
]
HTZ78_03720
Enzymes [BR:
synh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HTZ78_03720
DNA replication proteins [BR:
synh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HTZ78_03720
DNA repair and recombination proteins [BR:
synh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HTZ78_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
QUS59872
LinkDB
All DBs
Position
781447..784140
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AA seq
897 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPALIDRAIELGMPAIALTDHGVMYGAVELLKVCRGKPIK
PIIGNEMYVINGDIEINKRHRRFHQVVLAKNNQGYRNLVKLTTISNLKGIQGSGIFARPC
INKELLEQYKEGLIVTSACLGGEVPQAILKGDLDQARKVAKWYKDLFGDDYYLEIQDHGS
VEDRLVNINLVKIAQELDIKIVATNDSHFISCNDVEAHDALLCIQTGKLITEEKRLRYSG
TEYLKSAEEMRLLFRDHLPDDIIETAIANTVEVADKIEAYSILGEPRIPHYPIPPNHTPE
TYVEDIAWDGLLERLKCRERADIPAAYKERLEYELRMLEKMGFCTYFLVVWDYIKYARDH
GIPVGPGRGSAAGSLVAYCMKITNIDPVHHGLIFERFLNPERKSMPDVDTDFCIDRRDEM
IEYVTQKYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYAESDKMAKMIPVSRGKPAKLK
VMISDQTPEPQFKARYDNEPWVKKWIDMAIRIEGTNKTFGVHAAGVVISSEPLDQIVPLQ
KNNDGAVITQYYMEDVEAMGLLKMDFLGLKNLTTLQRAVELVAETKGVQLDLDDLPLQER
KALQIRARTGLKKLPDDVKNTHKLLEAGDLEGIFQLESQGMKQIVRDLKPSGIEDISSIL
ALYRPGPLDAGLIPIFINRKHGREEISYQHKLLEPILNETYGVLVYQEQIMKMAQDLAGY
SLGEADLLRRAMGKKKAEEMQKHRAKFVDGSAKNGVPSRTAENLFDQMVKFAEYCLSFDT
EILTVEYGPLPIGQIVEQEINCSVYSVDSEGRVYTQAIAQWHDRGEQEVFEYELADGSVI
RATPDHRFLTTDYQLLAIEEIFAKQLDLLTLANVEQTEEALDSHGLPSPLLNAGRIT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcggtctccatatccacagtgactatagcctcctggatggggcttcccaa
ttacccgccctgattgaccgggccattgagttggggatgccggcgatcgccttgacggat
catggggtgatgtatggggcggtggagttgctgaaagtctgccggggcaaaccgattaaa
cccatcatcggcaacgaaatgtatgtgattaatggtgacattgaaattaataagcgtcac
cgccgtttccaccaagtagttttagcaaaaaataatcagggttacagaaatttagttaaa
ctcaccaccatttctaacttgaaaggaatccagggtagcggcatttttgcccgtccttgc
attaataaagagttgctagagcaatacaaggaagggttgatagttaccagtgcttgcctg
ggaggagaagtgccccaggccattttaaaaggcgatttagaccaagccagaaaagtagcc
aaatggtataaagatttatttggcgatgactactatttagaaatccaagaccacggttct
gtggaagaccgcttagttaacattaacttggtcaaaattgcccaggaattagatattaaa
attgttgccactaacgattcccattttatttcttgcaacgatgtggaagcccatgacgcc
ctcctttgtattcaaaccggtaagttaattactgaagaaaaaagattacgttacagcggc
acagaatatcttaaatccgctgaggaaatgcgtttgctctttcgggatcatttaccggac
gatatcatcgaaacggcgatcgccaacacagtggaagtggccgacaaaattgaagcctac
agcattttaggggaaccccgcatcccccattatcctattccccccaaccatacccccgaa
acctatgtggaagacattgcttgggatggtctgttggaacggttgaaatgtcgcgaaagg
gctgacattcctgcggcgtataaagagcgtttggaatatgaattaagaatgctagaaaaa
atgggtttttgtacctattttctggtggtctgggattacattaaatatgcccgagaccat
ggtattcctgtggggccaggacgggggtcagcggcgggctctttggtggcctattgcatg
aaaattactaacattgacccggtacatcatggactaatttttgaacgtttcctgaaccca
gaacgaaaatcgatgcccgatgtggatacggatttttgcattgatcgccgagatgaaatg
attgagtatgtgacccaaaagtatggggaagataaagttgcccaaattattacttttaac
cgcatgacttccaaagcagtgctcaaggacgtggctagggtgctggatattccctatgca
gaatcggacaaaatggcgaaaatgatccctgtttcccggggtaaaccggctaaattaaag
gtgatgatttccgatcaaacccctgagccccaatttaaagctcgctatgataacgaacct
tgggtaaaaaaatggatcgatatggccattcgcattgaaggaactaacaaaacctttggt
gtccatgcggctggggtagtaatttcttccgaaccattggatcaaattgtaccgttgcaa
aaaaataatgatggagctgtaattacccagtattacatggaagatgtagaagccatgggt
ctgttgaaaatggattttttgggcttgaaaaatctaactaccctacagcgagcagtggag
ttagtggcagaaactaagggcgtccaattagatttagatgacttacccttacaggaacga
aaagccttacaaattcgtgcccgcaccggtttaaaaaagttacccgatgacgttaaaaat
acccacaaattattagaagcaggggatttagaaggcatttttcaattggaatcccaggga
atgaaacagattgtgcgggatctaaaaccttccggcattgaggatatttcatctattttg
gctttgtaccgtcctgggccattggatgcggggttaattcctatttttattaaccgtaaa
cacggccgggaagaaatttcctatcaacataaacttttggaacccattcttaacgagacc
tatggggtgctcgtgtaccaagaacagatcatgaaaatggcccaagatttagcgggatat
tccctaggggaagcggatttattgcggcgggctatgggcaaaaagaaagctgaagaaatg
caaaaacatcgggctaaatttgttgatggctctgctaaaaacggagtaccttcccgcacg
gcggaaaacttatttgaccagatggttaagtttgcagaatattgcctcagctttgatacc
gaaattttaacggtggaatatgggcctttaccaatcggccaaattgtcgagcaggaaatt
aattgctctgtgtatagcgttgattcggaggggagagtttacacccaggcgatcgcccaa
tggcatgaccggggagagcaggaagtgtttgaatatgaattagccgatggttctgtgatc
cgagccacccctgatcaccgctttttaaccaccgattatcaactgttggcgatcgaagaa
atttttgccaagcaactggacttgctaactttggccaatgttgagcaaactgaagaagcc
cttgacagtcatggtcttccctctccattgcttaacgctgggagaatcacataa
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